| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0389 |
|---|
| Symbol | |
|---|
| ID | 7093548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 426906 |
|---|
| End bp | 427685 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643463719 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_002360725 |
|---|
| Protein GI | 217976578 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.881359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG AGGACATTTT GCTGCTGAAC GCCTATCGCG ACGGCGAATT ATCGCCGGGC
GAGGCGCTGG CCATGGAGCG GCGGCTCGCT GAGAATCCCG AGCTCCGGGC GCAGGCTCAA
CGGCTGGAGG CTCTGTCCGG CGCTTTGCGC GGGGCTCTCG CCGGCGCGCC CGTTCCAAGT
GGGCTGCGCG GCCGGATCAT TCAGAAGATT GGCTTTCGCG ACGGCGCGCC GGGCGGCCGG
CTGACCCGTT TTCTGTCGCC GCTCGCGGCG ACTTTGCTGG TCGGGCTGGC GGGCGGCGTC
CTGCTCGGCA GCGGAACGAC TTTTCTGGCG ATGAACCGCC CCGGCGCCGA GACGTCCGGC
GAGATTCTTT CGGCCCATCT GCGCGCGATG ATGGCGCCGC AGCCGTTCGA CGTCGCTTCG
TCAAATCGGC ATGTCGTGAA ACCGTGGTTC AACGGCAAGA CGACGATCGC GCCCGACTCA
GTCGATCTTG GCGAACGCGG CTTTCCGCTG GCCGGCGGCC GCGTCGACGT GATCGACGGC
AGGCCGGCGC CGACGCTGGT CTACCGGCGC GGTCCCCATG TCATCAGCGT CACCGCGCTG
CCGCGCAGCG AGCTGGCGTC CTTGCCGGAA AGAGAAAGCC GCGCAGGCTT TTCGTTTGAG
CGATGGGCCG CGGGCGACCT CGCCTATGTC GCCGTGTCGG ATATCGCCCC GGCCGATCTA
CGGACATTTG TCGACGCCTT CCGCGCGGAA GCCGCGCCGC CGGCAAAGGC CGGAAATTAA
|
|---|
| Protein sequence | MTDEDILLLN AYRDGELSPG EALAMERRLA ENPELRAQAQ RLEALSGALR GALAGAPVPS
GLRGRIIQKI GFRDGAPGGR LTRFLSPLAA TLLVGLAGGV LLGSGTTFLA MNRPGAETSG
EILSAHLRAM MAPQPFDVAS SNRHVVKPWF NGKTTIAPDS VDLGERGFPL AGGRVDVIDG
RPAPTLVYRR GPHVISVTAL PRSELASLPE RESRAGFSFE RWAAGDLAYV AVSDIAPADL
RTFVDAFRAE AAPPAKAGN
|
|---|
| |