Gene Msil_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0349 
Symbol 
ID7091568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp387837 
End bp389645 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content65% 
IMG OID643463683 
ProductABC transporter related 
Protein accessionYP_002360690 
Protein GI217976543 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0287299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCC CTCTCCTCGT GCTGCAAAGC GTGTCATTGA CTTTTGGCGG ACGGGCTCTG 
CTCGAAGGCG CGGATCTCTC CGTCAGCGCC GGCGAGCGGC TGTGCCTCGT CGGACGCAAT
GGCTCCGGCA AATCGACGCT GCTCAAGATC GCCGCGGGAT TTCTCGAGAT CGATGGCGGA
TCGCGTTTTC TGCAGCCCGA CGCCACCATC CGCTATTTGC CGCAAGAGCC GGATCTCTCC
GGCTTTGACA CGGTCTTCGC CTATGTCGAG GCCGGGCTCG GACCGCTTGG CGATCCTTAT
CGCGGCCGGC GGCTATTGAA CGATCTCGGG CTGACTGGCG AGGAAAACCC CAAAACCCTC
TCTGGCGGCG AGGCGCGCCG CGCCGCGCTG GCGCGCGTTC TTGCGCCCGA GCCCGATATT
TTGCTCCTCG ACGAGCCGAC CAACCATCTC GATCTGCCCG CCATCGAATG GCTCGAGGCT
GAACTCAAAG GACTGCGCTC GGCGCTCGTC ATCATCAGCC ATGATCGCCG CTTCTTGCAG
AATCTCTCGC GCTGCACGGT CTGGCTCGAT CGCGGCCGCA CGCGCTCGCT GTCTCGCGGT
TTTGCCGATT TCGAGGCCTG GCGCGACCAG ACGCTGGAGG AGGAGGAGCG GCAAAGCCAC
AAGATGGACC GCAAGATCGT CGCAGAGGAG CATTGGCTGC GCTATGGCGT GACGGCGCGG
CGCAAGCGCA ACCAGAAGCG TCTGTCCGGT CTCAACGCGA TGCGGGTCGA GAGACGCCAG
CGTCAAGGGG CGGCCGGCGA CGTCAGACTC GTCGCCAGCG AGGGCAAGAT TTCCGGCAAG
CTCGTCGTCG AGGCCGATGA GATCAGCAAA TCCTATGGCG AGCGCCTGAT CGTCGCCAAT
TTCTCGACGC GGATTTTACG CGGCGACCGG GTCGGAGTGA TCGGCGCCAA TGGCGCCGGC
AAGACCACGC TGATCAAGAT CCTGACCGGC GCCGAGCCGC CCGATTCCGG CCGCGTGCGC
CTTGGCGCCA ATGTCGAGTT GGCGAGCCTC GATCAGGGCA GGGCGAGCCT CGATCCGGAA
ACCGCGCTGA AGGACGCCCT GACCGGCGGC GGCAGCGATT TCGTCGAGAT CAATGGCGAG
CGCAAGCATG TCGTCGGCTA TATGAAGGAT TTTTTGTTTG GGCCGGAGCA GGCGCGCACG
CCGATCGGCC GCCTCTCCGG CGGCGAGCGC GGCCGGCTGA TGCTGGCCCG GGCGCTGGCG
CGGCCGTCCA ATCTGCTGGT TCTCGACGAG CCGACCAATG ATCTCGATCT TGAGACGCTG
GACCTCCTGC AGGAGATGCT CGCCGATTAT AAGGGCACGC TGATTATCGT CAGTCATGAT
CGCGATTTTC TCGACCGCGT CGCGACCTCC GTCGTGTTGG CCGAAGGCGG CGGCCGCTGG
GTCGAATATG CGGGCGGCTA TTCCGATATG GTCGCGCAGC GCGGCTTTGG CGTCGGCGCG
GGCCCCAGCG CGGCCGCGCC CGGCAAAGCA AAGGCCGCGC CGGCGCCGCG TGCGGAAAAG
CCTGCGGCGA AGCCGAGATT GAGCTTTAAG GAGAAGCACG CGCTGGAAAC GCTCCCCGCG
CGCATGGAGC AATTGCGCAA GGAAATGGGG AGCCTGCGCC TGCTACTCGA CGATGCGGGA
TTTTACGCGC GCGATCCGGC GCGATTTGCC CAAACCTCGG CGGCTTTCGC CAAATATGAG
GCCGAACTCA ACGCCGCCGA GGAGGATTGG CTGGAGCTGG AAATTCGGCG CGAGGAAGTC
GGGGGTTAA
 
Protein sequence
MAPPLLVLQS VSLTFGGRAL LEGADLSVSA GERLCLVGRN GSGKSTLLKI AAGFLEIDGG 
SRFLQPDATI RYLPQEPDLS GFDTVFAYVE AGLGPLGDPY RGRRLLNDLG LTGEENPKTL
SGGEARRAAL ARVLAPEPDI LLLDEPTNHL DLPAIEWLEA ELKGLRSALV IISHDRRFLQ
NLSRCTVWLD RGRTRSLSRG FADFEAWRDQ TLEEEERQSH KMDRKIVAEE HWLRYGVTAR
RKRNQKRLSG LNAMRVERRQ RQGAAGDVRL VASEGKISGK LVVEADEISK SYGERLIVAN
FSTRILRGDR VGVIGANGAG KTTLIKILTG AEPPDSGRVR LGANVELASL DQGRASLDPE
TALKDALTGG GSDFVEINGE RKHVVGYMKD FLFGPEQART PIGRLSGGER GRLMLARALA
RPSNLLVLDE PTNDLDLETL DLLQEMLADY KGTLIIVSHD RDFLDRVATS VVLAEGGGRW
VEYAGGYSDM VAQRGFGVGA GPSAAAPGKA KAAPAPRAEK PAAKPRLSFK EKHALETLPA
RMEQLRKEMG SLRLLLDDAG FYARDPARFA QTSAAFAKYE AELNAAEEDW LELEIRREEV
GG