Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0339 |
Symbol | |
ID | 7091558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 378215 |
End bp | 379231 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643463673 |
Product | DNA polymerase III, delta subunit |
Protein accession | YP_002360680 |
Protein GI | 217976533 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.00729017 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTCGCGA TCAAAAGCTT TGAAGCGGAT AAATTTCTCG AACGGCCGGC GCCGCATATT TTTGTCTATT TGCTTTATGG CCCCGACGCT GGCCTCGTCG CCGAACGCGC CCGGGCCCTC GTCAAAAAAT CCGTCGACAA TCCCAAGGAT CCGTTCCAGC TGCTGCGCAT CGGCGGCGAC GATCTCGCCG CCGACCCGCT GCGCCTCGCC GATGAGGCCA ACACCATCGG CCTGTTCGGC GACCGGCGGG CGATCTGGAT CGAGGCGCAG GGCAGGGCCT TCGTCACGGC GCTGGAGCCT CTGTTCGCCG CCCCCCCGCA AGGCTCTACG ATCATCATTG AGGCCGGCGC GCTGAAGAAG GACGCCGTCT TGAGGCGCCT TTGCGAGCGC GAGAAAAGCG CCGCCGCGAT CGCCTGCATG CCGGATTCGC AAGAGGAGAT CGCCCATCTG ATCGAGCGGG AGGCTGCGGG CGCCGGCCTC AGCGTCTCGC CTGAGGCAAA AACCCTCCTG GCGTCGCTGC TCGGCCAGGA TCGGTTAGCT ACGCGCGGAG AGCTCGAAAA ACTGGTCCTT TACGCGCATG GCGCCGGCGC GATCGGGCTT GAGCATGTCG AGGCGATCGT CTCCGACGCC TCGAGCCTCC TGCTGGACCA CGCCGTCGAC GGCGCCTTTG GCGGCGACTT TGCGGCGGTC GAGGCTGGCG CGCGGCGGCT CGCCGCGCAG GGCGCCGACG TCAATCAGCT TCTCGGCGCG GCGCTTCGCT ACAGTCTCGG TCTGCGCCGC GCCCGCCTTG AGATCGACGC GGGCGGCGGA CACGGGCACG GCTACGGTTT TGGCCGGTCG CGCGCCTTCG ATCAGCATGT GCGGCTCTGG ACCGCCGAGC GGCTTGCGCG GGCGATCGAC ATTCTCGCCG AGGCCGTGCG GCGCACGCGG CGGGAGCCGA AACTCGCCCA GCCCATCGCG CTGCGGGCGC TATGGAGCGT CGCCTCGGCG GCGCAGGCGC GCGGCGCCAG AGCCTGA
|
Protein sequence | MVAIKSFEAD KFLERPAPHI FVYLLYGPDA GLVAERARAL VKKSVDNPKD PFQLLRIGGD DLAADPLRLA DEANTIGLFG DRRAIWIEAQ GRAFVTALEP LFAAPPQGST IIIEAGALKK DAVLRRLCER EKSAAAIACM PDSQEEIAHL IEREAAGAGL SVSPEAKTLL ASLLGQDRLA TRGELEKLVL YAHGAGAIGL EHVEAIVSDA SSLLLDHAVD GAFGGDFAAV EAGARRLAAQ GADVNQLLGA ALRYSLGLRR ARLEIDAGGG HGHGYGFGRS RAFDQHVRLW TAERLARAID ILAEAVRRTR REPKLAQPIA LRALWSVASA AQARGARA
|
| |