Gene Msil_0329 details

Gene Information

• Locus tag: Msil_0329
• ID: 7091548
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 368944
• End bp: 369627
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643463663
• Product: outer membrane lipoprotein carrier protein LolA
• Protein accession: YP_002360670
• Protein GI: 217976523
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 0.014302
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGCGAA CGCCAGCCTT TGTTTTCGCG GCTTTCGCCG GGCTCGCCTC CTTCGGCCTC 
CATGCCGAGC CGGCGCCTGC GACCGTAAAG CCAGCCAAGC CCGCCGCCGC GGCGGCTCCG 
ACAAAGCCTT TCGTTCCCAT GGACCCGCTG GTCGCGATCC AGAAGGCGAA TGATTATTTC 
AATACGGCGA CGACGATGAT CGGCGATTTC GTTCAGATCG GCCCGGACGG GCGTCGGGCG 
GAGGGCAAGA TCTTCGTCCA GCGGCCGGGC AAGCTGCGGT TCGAATATGC GCCGCCGGCG 
ACGCTTGAGA TCGTCGCGGA TGGCCTGTCC GTCGCAGTGC ATGATCGCAA GACGGCGACA 
AAGGACGTCT ATTTCATCAG CCAGACGCCG CTGAAGTTCT TGCTGAAGGA CCATGTGGAT 
CTCAATCGCG ACGTTAAAAT CGTTAATGTT GCGAGCGATC CGAGTTCCGT CGTGATTCAG 
GTCGAGGATA CGGCGACTTT CGGCGGAACC TCCGAGATAA AACTCATCTT CGATCCGGCC 
AAGTTCACGC TCAAGCAGTG GCAGGTTACA GATCCGCAAG GTTACGAAAC AGTAATCTCT 
TTGTTCAACA TCGATTTGAC CAAGAAACCA GACCCGAACA TTTTCCAGCT GACGCAGGAA 
CGGATTCCGA ACACAAATAA TTGA 

 

Protein sequence

MTRTPAFVFA AFAGLASFGL HAEPAPATVK PAKPAAAAAP TKPFVPMDPL VAIQKANDYF 
NTATTMIGDF VQIGPDGRRA EGKIFVQRPG KLRFEYAPPA TLEIVADGLS VAVHDRKTAT 
KDVYFISQTP LKFLLKDHVD LNRDVKIVNV ASDPSSVVIQ VEDTATFGGT SEIKLIFDPA 
KFTLKQWQVT DPQGYETVIS LFNIDLTKKP DPNIFQLTQE RIPNTNN