| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0328 |
|---|
| Symbol | |
|---|
| ID | 7091547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 367569 |
|---|
| End bp | 368726 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643463662 |
|---|
| Product | O-succinylhomoserine (thiol)-lyase |
|---|
| Protein accession | YP_002360669 |
|---|
| Protein GI | 217976522 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0116311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATG AAAAAGCGCT CCAGACCATC GCGGCCTCGA ACGGGGTCGC GGCGGACAGC
GCCTACGGAG CGGCGGCGCC GCCGATCTAT CTTTCGAGCA CCTTCGCCTT CAAGGGGTTC
GAGCGGCCGG GCGGTCACGA ATATACGCGA ACGAGCAATC CGACCCGCGA CCTCCTGGCC
GACACGCTGG CCAAGCTTGA GGGCGGCGCA GGCGCGGTGA CCCTGTCAAG CGGCATGGCG
GCGATCAATC TGCTGCTCGA TCCAATGGAG CGCGATGATC TCGTCATCGC GCCGCATGAT
TGCTATTCCG GCGTCCAAAG GCTCTTGTCC GCCCACGCCG CAAAGGGTCA TTTCAAGGTC
GAGTTCGTCG ATCAGAGCGA TGCGGAGGCC GTCGCCACGG CGCTCGGCCG CAATCCGAAA
CTTTTGATGA TCGAGACCCC GAGCAACCCA CTGATGCGCG TGGTCGACAT CAGGGCATTT
TGCGAGGCCG CGAAAAAAGT CGGCGCGAAG GTCGCCGTCG ACAATACGTT CCTCTCGCCC
GCTCTGCAGC GGCCGATCCC GCTCGGCGCG GATTTTGTCG TTCATTCGAT GACAAAATTC
CTCAACGGCC ATTCCGACGT GGTCGGCGGC GCCGTGATCT GCGCCAGCGA AAGCGACGCC
GAGGAGATGC GCGGCTGGGC CAATATCACC GGCGTCACCG GCTCGCCGTT CGATTCCTAT
CTGACATTGC GAGGATTGCG GACGCTGTTT CCGCGCCTCG AACGCCAGCA GCGCACTGCG
GAAACGATCG CGCTGTTCTT ACAACAGCAT CCTTCTGTCG AGGCGGTGCA TTATCCGGGG
CTCGTCTCGC ATCCCTCCCA TGCGCTCGCC AAGGCGCAGC AGGCGGGCTT TGGCGCGATG
CTGAGTTTTG AGGTCGCGGG CGGAATCGCG GCCGTGCGGC GGCTGGTGGA ATCGGTCCGC
ATTTTCACTC TGGCGGAATC GCTCGGCGGC GTCGAAAGCC TGATCGCCCA TCCAGCGACC
ATGACGCACG CCAGCATGGC CCCCGAGGCG CGCGCGGCGG CGGGGATCAA GGATAATCTG
CTGCGGCTCT CGGTCGGCCT CGAACATGAG GGGGATCTTG TGTCCGATCT GGCGCAGGCG
CTGAAGGCGC CCGCTTGA
|
|---|
| Protein sequence | MTHEKALQTI AASNGVAADS AYGAAAPPIY LSSTFAFKGF ERPGGHEYTR TSNPTRDLLA
DTLAKLEGGA GAVTLSSGMA AINLLLDPME RDDLVIAPHD CYSGVQRLLS AHAAKGHFKV
EFVDQSDAEA VATALGRNPK LLMIETPSNP LMRVVDIRAF CEAAKKVGAK VAVDNTFLSP
ALQRPIPLGA DFVVHSMTKF LNGHSDVVGG AVICASESDA EEMRGWANIT GVTGSPFDSY
LTLRGLRTLF PRLERQQRTA ETIALFLQQH PSVEAVHYPG LVSHPSHALA KAQQAGFGAM
LSFEVAGGIA AVRRLVESVR IFTLAESLGG VESLIAHPAT MTHASMAPEA RAAAGIKDNL
LRLSVGLEHE GDLVSDLAQA LKAPA
|
|---|
| |