| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0309 |
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| Symbol | mdoD |
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| ID | 7091527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 347932 |
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| End bp | 349506 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643463642 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_002360650 |
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| Protein GI | 217976503 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.105362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGCT TTGACCGGAG GTCGGTGCTG AAGGCCGCCG CTGCGATGGG TTTTAGCGCG
GCGGGATTCA GCGCGGCCGC GGCCTTGGAG GGGCTGAAGC TCGGTCCGGC GCGGCCTTTC
TCCTTTGAAG GGTTGAAGGC GGCGGCAAAG CGCAGGGCGG CCGAGCCCTA TGTCGGGCCG
CCGCATCCGG CGCCCGAGAT CGTCGGCAAG ATCAATTATG AGGCCTGGGG CAAAATCGCC
TTCGACATGG ATCATGCGCT ATTCGCCAAC GGTCCGGGGC GGTTTCCGGT CAGCTTTTTC
CATCTCGGCA TGTTCTTCCA GAAAGCCGTC GAGATGAATG TCGTCGAAGG CGCCAGCGCG
CGCGAGATCA TCTACGATCA AAGCTATTTC ACGATGCCGG ATGATTCCGT CGCCAAAAAG
CTGCCGCAGG GCGCGGGCTT TGCCGGCCTG CGTATTCAGG AGCCGCGCGA CGGCGCGCTC
GACTGGCGCA AGAATGACTG GGTCGCCTTT CTGGGCGCGG CCTATTTCCG TTCGATCGGC
GCGTTGCGCC AATATGGTCT CTCCGCCCGA GCGGTGGCGC TTAACGTGGC CGTCGCCGGC
AAGCCGGAAG AATTTCCCGA TTTCACCAAA TTCTATATCG ACGGGTCGGC GACAGGGGAT
TCGCTGACGA TCTATGCCCT GCTTGAAGGG CCCTCGATCG TCGGCGCCTG CCGTTTCGTC
ATGACGCGCG GCAAAGGCGT CGTCATGGAC ATCGATCAGA CGCTGTTCCT GCGCGCTGAC
GTGACGCGGT TCGGCCTGGC GCCGGTCACC TCCATGTACT GGTTTTCCGA GACGAAGAAG
GAGACCGGAA TCGACTGGCG CCCTGAGGTC CATGATTCCG ACGGGCTCGC CATCTGGTCG
GGGACCGGCG AGCGGATCTG GCGTCCGCTG AACAATCCGC CGCGCATCAT GGCGTCGGCT
TTCGGCGACG AAAATCCCCG CGGCTTCGGG CTTTTGCAGC GCGATCGCAA TTTCGATCAT
TATCAGGACG GCGTCTATTA CGAACGCCGC CCAAGCCTCT GGGTCGAGCC GTCCGGCAAA
TGGGGGAAAG GGAGCGTCGA GCTCGTCGAA ATTCCGACCG ACGACGAAAT CCACGACAAT
ATCGTCGCCA TGTGGACGCC TGCGACGCCA GCGACGGCCG GGTCGGATGT GTCGCTCGCC
TATCGCCTCC ATTGGCAGGC GGACGAGCCG TTTCCGACCG ATCTCGCCCG CTGCGTTGCG
ACCCGTCTCG GCAATGGCGG CCAGCCCGGC CAGCCGCGAC CGAAGGGCGT GCGGAAATTC
ATGGTGGAGT TCGCCGGGCC GCCGCTCGCG AACTTGCCAT TCGGCGAAAA GCCCGAGCCG
GTGCTGTGGG CCTCGCGCGG GACCTTCTCC TATATTTTCA CCGAAGCCGT GCCGGACGAT
CAGCCGGGCC ATTGGCGCGC CCAGTTCGAC CTGACCGCTT CGCCCGGGAT CGATCCGGTG
GAAATGCGCC TCTTCCTGCG GTCGGGCGAA AAGATCTTAA GCGAAACCTG GATCTTCCAA
TATCATCCTT TTTGA
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| Protein sequence | MTGFDRRSVL KAAAAMGFSA AGFSAAAALE GLKLGPARPF SFEGLKAAAK RRAAEPYVGP
PHPAPEIVGK INYEAWGKIA FDMDHALFAN GPGRFPVSFF HLGMFFQKAV EMNVVEGASA
REIIYDQSYF TMPDDSVAKK LPQGAGFAGL RIQEPRDGAL DWRKNDWVAF LGAAYFRSIG
ALRQYGLSAR AVALNVAVAG KPEEFPDFTK FYIDGSATGD SLTIYALLEG PSIVGACRFV
MTRGKGVVMD IDQTLFLRAD VTRFGLAPVT SMYWFSETKK ETGIDWRPEV HDSDGLAIWS
GTGERIWRPL NNPPRIMASA FGDENPRGFG LLQRDRNFDH YQDGVYYERR PSLWVEPSGK
WGKGSVELVE IPTDDEIHDN IVAMWTPATP ATAGSDVSLA YRLHWQADEP FPTDLARCVA
TRLGNGGQPG QPRPKGVRKF MVEFAGPPLA NLPFGEKPEP VLWASRGTFS YIFTEAVPDD
QPGHWRAQFD LTASPGIDPV EMRLFLRSGE KILSETWIFQ YHPF
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