Gene Msil_0305 details

Gene Information

• Locus tag: Msil_0305
• ID: 7091523
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 344503
• End bp: 345060
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643463638
• Product: RNA polymerase sigma factor
• Protein accession: YP_002360646
• Protein GI: 217976499
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 0.199092
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCGCGTCG AGGACCGCGA AAAGCAATGG CGCCTGCTCA TGCTGTCGGC CAATGGGGGC 
GACGCCGCGG CCTATCGGAA TTTGCTTGTC CAGCTGACGC CGGCGCTGCG CGCCTTCGCG 
CGAAGGGGCG TCGCGCGCGC AGGCGCCGCG CTGACCGACG CTGAGGATAT TGTGCAGGAG 
ACCCTACTTG CGGTGCATTT GAAGCGGCAG ACCTGGGATG AACAGGCGCC GCTCAGTCCG 
TGGCTTTTCG CCATCGCTCG TCACAAGCTG ATCGATGCGT TGCGGCGGCG CGGCCGGCGA 
ATAGAGCTGT CGATCGACGA TTTCGCCGAG TCTTTGCCGA GTGCCGACGC GGGATCCGAC 
TCGATTGTAT CCGACGTCAA GCGCCACCTC GAAGAGCTGC CGCCTGGCCA GCGCAAGGTG 
GTGAACTGCA TCGCAGTCGA GGGCGTCTCG ATCGACGAGG CGGCGAGCCG CCTGTCGATG 
AGCAATGGCG CCGTTCGCGT CGCTTTGCAT CGGGGCCTTG CGGCCCTTGC GGCAAAATTC 
AGGAGTGTTG AATCATGA 

 

Protein sequence

MRVEDREKQW RLLMLSANGG DAAAYRNLLV QLTPALRAFA RRGVARAGAA LTDAEDIVQE 
TLLAVHLKRQ TWDEQAPLSP WLFAIARHKL IDALRRRGRR IELSIDDFAE SLPSADAGSD 
SIVSDVKRHL EELPPGQRKV VNCIAVEGVS IDEAASRLSM SNGAVRVALH RGLAALAAKF 
RSVES