| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0265 |
|---|
| Symbol | |
|---|
| ID | 7090583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 304997 |
|---|
| End bp | 307651 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643463598 |
|---|
| Product | Sel1 domain protein repeat-containing protein |
|---|
| Protein accession | YP_002360606 |
|---|
| Protein GI | 217976459 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0121173 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCCGG AGGATCATGA TAGCGAATCG GAAAACGCTT CGCTTCGGCG CGCCGCTCAA
CAGCGCGCCG ACGAAACGGC GGCGTCGCTG GAAAGCTGGC TGCGCCGCGC GATGACGCGG
ATCGCCGAGC GCGGAGCCGA CAAGGCCGCG CCTGTCGATC TCACGGAGAG TCTCGCCGCC
ATGGCGGCCC TGCTGAACGA GGCGTCGCGT GGCGCGCCCA CCAGCGATTC TCCCCAGCCG
CCGTCCAGCC AAGACCCGTT TCGAGGCGCG GGCGCGCGCG AAGCCGTGCT CCCGCCTGTC
TCCGCAGACG CGCCGGGCGA CCGCGCGATC TCGGCGCCGG CTGGGCAAAG CGCCAGGGCC
CGCGCGCTAT CCGAATTGAA AGCTCGGCTC GACGATCTGG AGCGCATCAT CCGCGCCGGC
GGCCGCGCCG CCGCGGACCC CGCGTTGCGG CTCGCCCTGA AGGATATTGA GACGCGGCTC
AGATCATCCG CGAACTCCGA GCCAGATGAT GACGGTCCGT CCGGCCGCGA AACGCCGTCA
GGGACAGGCG CTGCGGCCCT CACGCCCGCC GCGCCAGGGG AGCCGCCCGA ACGCGACGGC
GAAATCGGCG GCTTGCAGGC TCTGACCAAG CGGCTGCGCG ATCAACGGTC TCAGCGGCAG
GCGTCCCGCG CCGCGACGGA CGCCGGCGCA GTCGAGACGC TCGCGCCGGA GCTTCGCGCC
CTGACGCGCC AGATCGAGAT GGGGCAGCGC CAGCTCGGCG AGAAAGTTGA GACCGAGCTG
CAATCTCTCA CCTTCAAACT TGAGGCGACC CGCAAGCAGA GCCCGGGCGA TCTCGCAATG
GACGCCCTCG AGCAGAAGAT CGCGGCGATC ACGCAGCGGC TCGAGACGAC CGATCGCGGT
TTCGCCTCGA TCGCCAATCT TGAACAAACC ATCGCCCGGC TTTCCGAACA GCTCGGCCAG
GACGCTGAGG GCAAGGACCG CATCCTTGAT TCCAGCAACG AAGCCCGCGA GGAGGCGGAC
CGACGGGTTC ATCTCGCGCT TAACGCCGTG CAGGAGTCCG TCGGCCAGAT CGCCAACCGG
CTCGCCCGGA TCGAGGCCGA CATCGGCGAG GCTCGGCCCG CCCGCGACGC GGCCCCCGAA
GAGCCGGTTC GCCGGACAGC AACCGACGTT GCGACGCAGG CCGAGCTGCT GACGGGTCAA
GCGGCGGCCA ACGGCGGCCG CAGCCCGAAC GCGGTCGGGG ACGATATTCT GATCGAGCCG
GGGGCAGGTC TTCCATGGCG CTTTGGGGCG CCGCCGGATC GTCTCGCCGC CGTTTTTGGT
CACTCGGCCG GGGAGTCCGG CGCGGTTCTC GCGCCCTCCC CTGTCGCAGC GAAACCGCTC
GCGCCGCACG AGCGGCCTGT GGCGATCCCG GCCGACCTGC CGGCCGCTCG CGCGCCGGCG
CCGAAGCAGA ATTTCTTCCG CGCCCATCGC GCTTCGCTCG TCTCGGGCCT TGCCGCCCTT
AGCCTTGCGC TTGGCGTGAT CGCGCTGGCG AAAACCGGGG CCCTTAAACC GGTGCGTCCG
GCGGCCCTGC TGAAGCCGGT TGGCCAAGCC CGGACAAATC GAGACGCCGC GAAAGCGCCC
GCGGCGCCAA GCGCCGCCCA AGCCGAAGCC CCTCCCCCTG CGGCGCCTCA GAACGCTGCC
GCCGCTGTAG GCGGAATCCC CAAGGAGCCC ACACCTCCGA GCGCGCCGGC GCAACCGGAG
CCCCCGAAAC CCACGGACCT CAGCCTGTTC GATCCGGCGG CGCTCAACGC CGGACAGGCA
GGCTCAATCC GGGCGGCGGC CGAGCCTGGC GGCGACCAAC TCGCCACGCC CCTGACGCGG
CTGATCGCAG GAAGCGATCC CATTCTGTTT GAAGGCGTCA TCGCTCGGGC AGAGCCTGCG
ACTGCGCCCG GCGGCTTTTT TGCGCCCTCT CTCTCGCCCG CCTCGCTGTT GAAATCGGGC
GCGCCGCCGG CCTTGGCTCC GGCCAATCTC GCCCGGCTCG CTGGGACGCC GCTTGACGAT
CTGCGCGCCC GCGCCACCGC GGGCGACGGC GCGGCGCAAT TCGAACTTGG CGCCCGCTAT
GCGGACGGAC GGGCCGGCGT ACAAGATCTC GCCCTCGCCG CTGGATATTA TGCGAAGGCG
GCCGGGAGCG GCCTCGCGCT CGCGCAATAC AGGCTGGCGA CGATGACCGA AAAGGGCGCC
GGCGTCAGCC GCGACCTTGG CCGCGCCAAG GCGCTGTATG AAGCCGCGGC GGCGCAGGGC
AATGTGCGCG CCATGCACAA TCTCGGCGTT CTCGCCGCGC AAGGCGCCGA GGCCGGGCCC
GACTATACGA CGGCCGCCGT CTGGTTCGAG CAGGCCGCAA AATTCGACGT CCGCGACAGC
CAGTTCAATC TCGCGGTTCT TCTGGCGCGC GGTTTGGGGA CGCCGCCCGA CGCCGGCCGC
GCCTATGTCT GGTTCTCGAT CGCGGCGGCG GGCGGCGACG CCGAGGCCGA CCGAAAGCGC
GCCGATATCG CAACAAAGCT GTCGCGCGAG GATCTCGACG CCGCCAAAGC GGCCGTTCTT
TCCTTCAGGC CGCAGACGCT CGATCCGCTT GCGAATGAAT TGAGCCTCAC CTCAAGCCGC
GCCGCGCGCA ACTGA
|
|---|
| Protein sequence | MRPEDHDSES ENASLRRAAQ QRADETAASL ESWLRRAMTR IAERGADKAA PVDLTESLAA
MAALLNEASR GAPTSDSPQP PSSQDPFRGA GAREAVLPPV SADAPGDRAI SAPAGQSARA
RALSELKARL DDLERIIRAG GRAAADPALR LALKDIETRL RSSANSEPDD DGPSGRETPS
GTGAAALTPA APGEPPERDG EIGGLQALTK RLRDQRSQRQ ASRAATDAGA VETLAPELRA
LTRQIEMGQR QLGEKVETEL QSLTFKLEAT RKQSPGDLAM DALEQKIAAI TQRLETTDRG
FASIANLEQT IARLSEQLGQ DAEGKDRILD SSNEAREEAD RRVHLALNAV QESVGQIANR
LARIEADIGE ARPARDAAPE EPVRRTATDV ATQAELLTGQ AAANGGRSPN AVGDDILIEP
GAGLPWRFGA PPDRLAAVFG HSAGESGAVL APSPVAAKPL APHERPVAIP ADLPAARAPA
PKQNFFRAHR ASLVSGLAAL SLALGVIALA KTGALKPVRP AALLKPVGQA RTNRDAAKAP
AAPSAAQAEA PPPAAPQNAA AAVGGIPKEP TPPSAPAQPE PPKPTDLSLF DPAALNAGQA
GSIRAAAEPG GDQLATPLTR LIAGSDPILF EGVIARAEPA TAPGGFFAPS LSPASLLKSG
APPALAPANL ARLAGTPLDD LRARATAGDG AAQFELGARY ADGRAGVQDL ALAAGYYAKA
AGSGLALAQY RLATMTEKGA GVSRDLGRAK ALYEAAAAQG NVRAMHNLGV LAAQGAEAGP
DYTTAAVWFE QAAKFDVRDS QFNLAVLLAR GLGTPPDAGR AYVWFSIAAA GGDAEADRKR
ADIATKLSRE DLDAAKAAVL SFRPQTLDPL ANELSLTSSR AARN
|
|---|
| |