Gene Msil_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0253 
Symbol 
ID7090571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp291194 
End bp291754 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID643463587 
ProductHPr kinase 
Protein accessionYP_002360595 
Protein GI217976448 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0460144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCG CGCGCCTGAG CCCGGCCACG GAGCCCCGCG AAGCACTAAA CATCCACGCC 
AGCGCCATCG TCATTCAGGA AGCCGGCGTT TTGATCCGCG GCGCTTCGGG CGCGGGCAAG 
AGTTCGCTGG CGCTGGCGTT GATCCAGACG GCCGCCAATG CCGGCCTGTT CGCCCGTCTC 
GTCGGGGACG ACAGGATCGA AGTCAGCGCC CGTCACGGCC GGCTCATCGC GCGAGGCCAC 
AAGGCGATCC TTGGACGGAT CGAGCAACGC GGCGTCGGCA TTCTCGAACG ACCTTACTTA 
AGCGCCGCCG TCATCCGGCT CATCGTCGAT CTCGTCCCGC CGGACGAGGC GCCCCGCCTC 
CCCGATGCAG CGCGCGGTCT TGGGGCCGAA CCGAAAACGC TGGAGCCTTG CGTTTGCGAC 
GACTGGGACT TTCGCAGCCT GGAGCAAATC GCGATCTTGG GCGTCCGCCT TCCCCGCGTC 
AGGCTGCCGG ATCACGCCTC CGCCGCCGAC CTCGCGCTCG CCATTCTGCA ACGGTTTCGC 
TGCGTGCGAA GCGGCGACTG A
 
Protein sequence
MAAARLSPAT EPREALNIHA SAIVIQEAGV LIRGASGAGK SSLALALIQT AANAGLFARL 
VGDDRIEVSA RHGRLIARGH KAILGRIEQR GVGILERPYL SAAVIRLIVD LVPPDEAPRL 
PDAARGLGAE PKTLEPCVCD DWDFRSLEQI AILGVRLPRV RLPDHASAAD LALAILQRFR 
CVRSGD