Gene Msil_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0252 
Symbol 
ID7090570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp290451 
End bp290852 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content60% 
IMG OID643463586 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_002360594 
Protein GI217976447 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.173613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGGAA TGGTCCTCGT GACGCATGGG CATCTCGCGA CCGCGTTCCG TGCGGCGCTG 
GAGCATGTCG TCGGCCCGCA GAAACAGATC TCGACCATTT CAATCGGACC TGACGACGAT 
ATCGAGCAGA GACGCAAGGA GATCGTCGAG GCCGTCGAAG ACGTCGATAG CGGCTTCGGC 
GTCGTCGTTC TCACCGATAT GTTCGGGGGA ACCCCCTCCA ACCTCGCGAT TTCGGTCATG 
AACGGGGCCC ATGTCGAGGT CGTCGCCGGC ATCAATCTGC CCATGCTGAT CAAACTCGCC 
TCGGTGCGGG AAACCTCCAG CCTTGAGCAG GCGGTGATCC AGGCGCAGGA TGCCGGAAGG 
AAGTATATTT ACGTCGCAAG CCGCGTGTTG AGCGGCAAAT GA
 
Protein sequence
MIGMVLVTHG HLATAFRAAL EHVVGPQKQI STISIGPDDD IEQRRKEIVE AVEDVDSGFG 
VVVLTDMFGG TPSNLAISVM NGAHVEVVAG INLPMLIKLA SVRETSSLEQ AVIQAQDAGR 
KYIYVASRVL SGK