| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0226 |
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| Symbol | |
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| ID | 7090543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 252329 |
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| End bp | 253942 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643463560 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002360569 |
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| Protein GI | 217976422 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.547651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACG GCCGCCCCCC CGCGATCCTC GGCGACTGGT GGCGCCCCGG CGCGATCTAC
CAGATCTATC CGCGCTCCTT CCAGGATTCG GGCGGCGACG GCATTGGCGA TCTCGAAGGG
ATCCGGCGCC GTCTCGATTA TCTCGTCGGC CTTGGCGTCG ACGCGATCTG GATTTCGCCG
TTCTATCCCT CGCCGATGCA TGACTTCGGC TATGACGTCT CCAATTATTG CGACGTCGAT
CCGATTTTCG GCTCCCTTCG CGATTTCGAT CTTCTTCTGG CGGACGCGCA TCGGAGCGGC
CTCAAGATCG TCCTGGATTT CGTGCCGAAC CACACCTCGA TCGAGCATGA ATGGTTCGCT
GCAAGCCGAC AAAGGCGGGA CGACAAGAGC GACTGGTATA TCTGGCGCGA CGGCGCGCCC
TCCGGCGGCC CGCCCAACAA TTGGCGCAGC CATTTTGGCG GCCCGGCCTG GAGTTTCGAT
TCCGCGCGCG GCCAATATTA TTATCACGCC TTTTTGCCGC AGCAGCCCGA CCTCAACTGG
CGCAATCCCA AGGTCAAGGC GGCGATGTTC GACGTGCTGC GGTTCTGGCT GCGGCGCGGC
GTCGACGGTT TTCGCGTCGA CGTCATTTCG CAGCTCATGA AGGATGAAGC GCTGCGCGAC
AATCCGGCAA ATCCCGGTTG GACGCCGCTC CGGCCGCAGA TCGAGGAGCT GCTTCAGCTC
TATTCCGGCG ATCAGGATGA TATTCATCCT TTGATTGCGG AGATGCGCGG CGTTCTCGCC
GAATTTGGCG ATCCTTTGCT GATCGGCGAG ATCTATCTGC CGATGGAGCG CCTTGTCGCT
TATTACGGCG CGGCGCTTTC CGGCGCGCAT CTGCCGTTCA ATTTTCAGCT TCTCGAAACC
CCCTGGCAGG CTGAATCGCT TGGCGCGATG ATCGCCTCCT ACGAGGCCCT TTTGCCGGAG
GGCGCGTGGC CGAACTGGGT CCTCAGCAAC CACGATCGGC CGCGTGTGGC GACGCGCGTT
GGCGACGCGC AGGCGCGCGT CGCGACGATG CTGCTCCTGA CCCTGCGCGG CACGCCGACG
CTGTATTATG GGGATGAGCT CGGGATCGGC CATGTCGACA TTTCGCCGCC CCGCATCCGC
GACCCCTGGG CCCTGCGCGA ACCCTCGCTC GCGGTGGGGC GCGATCCGGT GCGCACGCCC
ATGCAATGGG ACGACAGCGC CAACGCCGGC TTCTCGACGC ATGAGCCATG GCTGCCGCTG
ACGCCGGACT GGCCAGAGCG GAACGTCGAG CGCTTCGAGG CGGAGCCCGC ATCGCTGCTT
CATCTGACGC GCCGCCTGCT CCACTACCGC CGCGATCATC GCACGCTGTC GCTCGGCTCA
TGGCGCCTGC TGGCGAGCAG CAATGAACTG CTCGCCTATG AACGCCGCTC CGGGCAAGAG
ACGACAATCG TCGTGCTCAA TCTCGGCGGC GCGTCGCAGC TTTGGCGGCT CGATCCCGCG
GGCTCGTCGT TTTGCGTGGC GATTTCGACT TATTGTGACC GGGCGGGCGA ACGCGTCGAT
CAAGTGCTGC GCCTGCGGCC GGATGAGGGC GTTGTGCTCG CGGTGTTGGG CTGA
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| Protein sequence | MTDGRPPAIL GDWWRPGAIY QIYPRSFQDS GGDGIGDLEG IRRRLDYLVG LGVDAIWISP
FYPSPMHDFG YDVSNYCDVD PIFGSLRDFD LLLADAHRSG LKIVLDFVPN HTSIEHEWFA
ASRQRRDDKS DWYIWRDGAP SGGPPNNWRS HFGGPAWSFD SARGQYYYHA FLPQQPDLNW
RNPKVKAAMF DVLRFWLRRG VDGFRVDVIS QLMKDEALRD NPANPGWTPL RPQIEELLQL
YSGDQDDIHP LIAEMRGVLA EFGDPLLIGE IYLPMERLVA YYGAALSGAH LPFNFQLLET
PWQAESLGAM IASYEALLPE GAWPNWVLSN HDRPRVATRV GDAQARVATM LLLTLRGTPT
LYYGDELGIG HVDISPPRIR DPWALREPSL AVGRDPVRTP MQWDDSANAG FSTHEPWLPL
TPDWPERNVE RFEAEPASLL HLTRRLLHYR RDHRTLSLGS WRLLASSNEL LAYERRSGQE
TTIVVLNLGG ASQLWRLDPA GSSFCVAIST YCDRAGERVD QVLRLRPDEG VVLAVLG
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