Gene Msil_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0209 
Symbol 
ID7090526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp222228 
End bp224099 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content61% 
IMG OID643463543 
Productaspartyl-tRNA synthetase 
Protein accessionYP_002360552 
Protein GI217976405 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.789469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCT ACCGTTCCCA TACCTGCGGC GATCTGCGCG AAACCGACGC CTTGCAGCCG 
ACCCGGCTTT CCGGCTGGTG CCACCGCATC CGCGACCATG GCGGCGTGCT GTTCATCGAC
CTTCGCGATC ACTATGGAAT CACGCAATGC GTCGTCGATC CTGATTCGGG CGCCTTTCCC
CTCGCCGAGA AGCTGCGCTC CGAATGGGTC GTCCGGATTG ACGGGCTCGT GCGCCAACGC
CCGGCCGGCA CCGAGAACAT CGAGATGCCG ACCGGCCTCA TCGAAGTCTA TGTGACGGAG
ATCGAAGTTT TGGGCGCGGC CGCCGAATTG CCGCTGCCGG TGTTTGGCGA CCAGAATTAT
CCCGAAGACA TGCGGCTGCG CTATCGCTTC CTCGATCTCA GGCGCGAAAA ACTCCACAAC
AACATCATGC TGCGCGGACG GGTGATCGAT TCGCTCCGCG CGCGCATGAA GGGGCAGGGG
TTTTTCGAAT TTCAAACGCC GATCCTGACA GCTTCGAGCC CCGAGGGCGC GCGCGATTTT
CTCGTGCCCT CGCGTCTGCA TCCGGGCAAA TTCTACGCCC TGCCGCAGGC CCCGCAGCAA
TTCAAGCAGC TGCTCATGAC GGCTGGCTTC GACCGCTATT TCCAGATTGC GCCCTGCTTC
CGTGACGAGG ATCTGCGCGC CGACCGCAGC CTCGAATTCT ATCAGCTCGA TATCGAGATG
AGCTTCGTCA CGCAGGAGGA TATTTTCGCC ACCGTCGAGC CGGTGCTGCG CGGCGTCTTC
GAGGAGTTCG GCGAGGGTTT TGCGGTGACG CCGGAATTCC CGCGCATCCC TTACGCCGAG
ACGATGCTGA AATATGGCAC GGACAAGCCG GATCTGCGCA ATCCGCTCGT CATCGTCGAC
GTGACGGAGG AGTTTTCGCG CGAGGACGTC AGCTTCAACG CCTTCAAGAA CGTCATCAAG
CAGGGCGGCG TCGTGCGCGC CATTCCGGCG CCGGGGGCCG GCGCGCAGCC GCGCTCCTTC
TTCGACAAGC TGAATGATTG GGCGCGGGGC GAGGGCGCGG CCGGTCTCGG CTATGTGATT
TTCGAGGGCG ACGCTGGAGC GCTCGTCGGC AAGGGTCCGA TTGCGAAATT CCTTCCCGCC
GACGTGCAGC AGGCGATCGC CGCCAAGGCC GGCCTGAAGT CCGGCGACGC CGTGTTCTTC
GCCTGCGACC GGCCGGATCG GGCCGCCAAG CTCGCCGGCG CGGCGCGGCT TCGCATCGGC
TCGGAGCTTA AACTGTCGAA AACCGGCGTG TTCGAACTTT GCTGGATCGT CGATTTCCCG
ATGTATGAAT GGAACGAGGA CGAGAAGCGA ATCGATTTCT CGCATAATCC GTTCTCGATG
CCGAATTGCA ACCTAGAGCA GTTTCTCGCT CTAGAGACCG GTGTCCGTGA AGAAATTGTT
GGAATTGACC GAGGGGAGCG CAATCGCGAT TTAAATGAGA GCAATGAACT TCGGAAGCGG
ATACTCGAAA TAACCGCTTT TCAATATGAC GTTGTCTGCA ACGGCTTTGA GCTGTCGTCC
GGCGCGATCC GAAATCACCG TCCCGACATC ATGCGCAAGG CCTTCGCGCT CGCCGGCTAT
GATGAAACAG TGCTGGAGCA GAAATTCGGC GGCATGTACC GCGCCTTCCA CTACGGCGCG
CCGCCCCATG GCGGCATTGC GCCGGGCGTC GATCGCATCG TCATGCTGCT CGCGGGCGAG
GAAAATCTGC GCGAGATCGT GGCTTTCCCG ATGAATCAGC GCGGCGAGGA TCTGTTGCTC
GGCGCCCCCT CCAATGTGAC GGCGAAGCAA CTGCGCGAGC TCTCGATCAA GCTCAATTTG
CCGGAGAAAT AG
 
Protein sequence
MHRYRSHTCG DLRETDALQP TRLSGWCHRI RDHGGVLFID LRDHYGITQC VVDPDSGAFP 
LAEKLRSEWV VRIDGLVRQR PAGTENIEMP TGLIEVYVTE IEVLGAAAEL PLPVFGDQNY
PEDMRLRYRF LDLRREKLHN NIMLRGRVID SLRARMKGQG FFEFQTPILT ASSPEGARDF
LVPSRLHPGK FYALPQAPQQ FKQLLMTAGF DRYFQIAPCF RDEDLRADRS LEFYQLDIEM
SFVTQEDIFA TVEPVLRGVF EEFGEGFAVT PEFPRIPYAE TMLKYGTDKP DLRNPLVIVD
VTEEFSREDV SFNAFKNVIK QGGVVRAIPA PGAGAQPRSF FDKLNDWARG EGAAGLGYVI
FEGDAGALVG KGPIAKFLPA DVQQAIAAKA GLKSGDAVFF ACDRPDRAAK LAGAARLRIG
SELKLSKTGV FELCWIVDFP MYEWNEDEKR IDFSHNPFSM PNCNLEQFLA LETGVREEIV
GIDRGERNRD LNESNELRKR ILEITAFQYD VVCNGFELSS GAIRNHRPDI MRKAFALAGY
DETVLEQKFG GMYRAFHYGA PPHGGIAPGV DRIVMLLAGE ENLREIVAFP MNQRGEDLLL
GAPSNVTAKQ LRELSIKLNL PEK