| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0171 |
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| Symbol | |
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| ID | 7090488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 173393 |
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| End bp | 174865 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643463505 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002360514 |
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| Protein GI | 217976367 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCTTCC GCGCCTCGTT TCCAGCCCTG GCTTCAATCG TCGCGCTGGC CGCCGGCCTT
TGCGGCTGCG CCGTCGGCCC GGATTATATG AAGCCTTCGG CTCCAACGCC TATCCGCTAC
AAGGAGCTGA AAGGCTGGAA GACGGCGACT CCTCTCGACG GCGCCGACCG CGGCCAATGG
TGGGCGCCGT TCCGGGATAA AACGCTCGAT TCGCTTATCA GCCAGGTGTC GATCTCCAAC
CAGACAGTCA TCGGCGCCGA GGCGGCCTAT CGCACCGCCA AATCGCTCGT GCGCGAAGCG
CAGGCAGGAC TGTTCCCGAC TGTCTCCCTC AATTATTCCG GAACGGGAAC GCATAGCGGA
AGCAAGACGA GCGGATTTAA CACGGGCAGC TCCTCCACTT TATTTACCTC GGACCTTGCG
ACCAACGCCA GCTGGACGCC GGATATATGG GGTCTGGTGC GGCGCTCGAT CGAAAGCAAC
GCCGCGGGCG CGCAGCTTTC GGCCGCGGAC CTCGCCAATA CGACGCTGGC GTCGCAATCG
CTGCTCGCGA CCGCCTATTT CAATCTGCGC GCCGCCGATG CGCTAAAAGA TTTGCTGGAG
CGCACGGCGA AGGAATTTCA GCGCACGCTG GAGATCACTC AGCGCCAATA TACAGCGGGA
ACCGTCTCCA AGGCGGATGT CGCGACGGCG CAGGCGCAGC TCTTCAACAC GCAGGCGCAG
GCGATCAACG CCGGCATCGC CCGCGCCCAA TATGAGCATG CAATCGCGGT GCTGATCGGC
GTTCCGCCGG CCGAACTCAA CATCGCGGTC GCTCCGTTCA AGACGACGCC GCCCACGGTT
CCCGTGAGCC TGCCTTCGGT CCTGCTCGAA CGCCGGCCCG ATATCGCCGC GGCCGAGCGT
TCCATGCAGG CGCAAAACGC GCTGATCGGC GTCGCCGTCG CCGCCTATTA TCCGAACATC
AGCCTCTCTG GCGCCTTCGG CTTCGCCGGC CGCGGGCCCC TCGCCGTCTC CCTCGCCAAT
GAGGCGTGGA GCGTCGGCGT GGCTGCGGCG CAGACGGTGT TCGACGGCGG ATTGCGCAGC
GCCACGGTGG ACGCCGCACG CGCAACCTAT GATCAAAGCG TCGCCAATTA CAGGCAGACG
GTGCTTTCAG CGTTTCAGGG CGTCGAGGAC CAGCTCGTCG CCCTGCGCCT GTTGGCGCAG
CAAGCCAAGG TCCAGGACGA CGCCGTCAGG GCGGCGCAGG AAGAAGTCGA CGTCCTGCTC
AACCAATATT CCGCCGGCAC GGTCGCCTTC ACGGCCGTCG TCGTGGCGCA GGCGCAATTG
CTGACCAACC AGACTTCGGC GCTAACCATC CGGCAAAATC GATACATCGC CACCGTCCAG
TTGATCGAGG CGCTTGGCGG CGGCTGGAAC GTCAAGGATC TTCCGGCCAT TGCGGAGATC
GAAGACTCCA ACCCCCTGCT GCCGCGCTTA TAG
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| Protein sequence | MTFRASFPAL ASIVALAAGL CGCAVGPDYM KPSAPTPIRY KELKGWKTAT PLDGADRGQW
WAPFRDKTLD SLISQVSISN QTVIGAEAAY RTAKSLVREA QAGLFPTVSL NYSGTGTHSG
SKTSGFNTGS SSTLFTSDLA TNASWTPDIW GLVRRSIESN AAGAQLSAAD LANTTLASQS
LLATAYFNLR AADALKDLLE RTAKEFQRTL EITQRQYTAG TVSKADVATA QAQLFNTQAQ
AINAGIARAQ YEHAIAVLIG VPPAELNIAV APFKTTPPTV PVSLPSVLLE RRPDIAAAER
SMQAQNALIG VAVAAYYPNI SLSGAFGFAG RGPLAVSLAN EAWSVGVAAA QTVFDGGLRS
ATVDAARATY DQSVANYRQT VLSAFQGVED QLVALRLLAQ QAKVQDDAVR AAQEEVDVLL
NQYSAGTVAF TAVVVAQAQL LTNQTSALTI RQNRYIATVQ LIEALGGGWN VKDLPAIAEI
EDSNPLLPRL
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