Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0170 |
Symbol | |
ID | 7090487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 171792 |
End bp | 173144 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643463504 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002360513 |
Protein GI | 217976366 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.736393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGACC GCACCCGGCC GCCGGGCACA GACCCCCTCG ATCCGGTCTA TCTTCGCGAG GAGGCGAAGG CGCCGAAATC GACTCCTGCG CCGCTGCAGC CGGTCGGCGC GACCGCGCCG GCCAAGTCGA CGCTGCGGCG GGCGATCCTC ATCGTGCTCG CCGCGCTGAT CGCCTTCGGA ACCTATCGCT TCATCAAGAT GGACCATTCG AGCGCCACAG GGCCGGCGCC GCAGGCGGCC CAGGCGCAGC CGGTCGGCGT CGCAACCGTC GCAAAGGGCG ACATCAACAT TCTCGTCAGC GGGCTTGGGA CGGTGACGCC GCTCGCTAAT GTGACGGTCA AGACGCAGAT CAACGGACAG TTGATCGACG TCGGCTTCAA AGAAGGCCAG ATGGTCAAGA AAGGCGATTT TCTGGCCCAG ATCGATCCGC GGCCCTATCA GGTCGCCAAA GAACAATTTG AAGGGCAACG CGACCGCGAC CAGGGCCTGC TCGATCAGGC GCGCAACAAT ATGCAGCGCT TCCAGACGTT GCTGAAGCAG GATTCGATCG CCCGCCAAAC CGCCGAGGAC CAGATCTATC TCGTCAAGCA ATATGAGGGG GCGCTGAAGG CCGATCAGGC CCAGATCGAC GCGCAGACGC TCAATCTCAC CTATGCTCGC ATCGTGTCGC CACTCGACGG CCGCGTCGGC CTGCGCCTTG TCGATCCCGG CAATTACGTG CAGACCAGCG ATACCGGCAT CGCGGTCATC ACCCAGCTGC ACCCGATCTC CGTGATCTTC ACCGTGCCGG AGGATGAGCT TCAGGCCATC CTGGACCGGA TGAACACGGG CGCCGAACTG CCGGTGTCTA TCTTCGACCG CGCCTATGTG AACAAGCTTG CAACCGGCAA GCTTTCGAAT GTCGACAATC AGATCGACGC CACGACGGGC ACCATCAAGA TCCGCGCCGA ATTCGACAAT CTCGATGACA AGCTGTTTCC GAACCAATTC GTCAACGCGC AGCTTCTGAT CGACACCTTG CGCGGCGCCG TAACGGCTCC GGTGACGGCG ATCCAGCGCG GCGCGCCGGG AACCTATGTC TACCTCGTCG GAGCGGACGA CAAGGTCGTC ATGCGCAAGG TGACGCTCGG CCCGCAGGAA GGCGGCCGCG TCGCCATAAC CGCCGGGCTG GCGCCGGGCG ACCGCGTCGT CGTCGATGGA ACCGATAGGC TGCGCGACGG GGCTGAAGTC TCCATTGCGG CCATTGACGG CGTCGCCACC GACCCCCCGG CGAAAGATCA GGCGGGCGCA ACGCCCGATG GCAAATCGGG ACACGGATCC AGGCGTCACG GGCAGCAGCC GGGGGCGCAA TGA
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Protein sequence | MDDRTRPPGT DPLDPVYLRE EAKAPKSTPA PLQPVGATAP AKSTLRRAIL IVLAALIAFG TYRFIKMDHS SATGPAPQAA QAQPVGVATV AKGDINILVS GLGTVTPLAN VTVKTQINGQ LIDVGFKEGQ MVKKGDFLAQ IDPRPYQVAK EQFEGQRDRD QGLLDQARNN MQRFQTLLKQ DSIARQTAED QIYLVKQYEG ALKADQAQID AQTLNLTYAR IVSPLDGRVG LRLVDPGNYV QTSDTGIAVI TQLHPISVIF TVPEDELQAI LDRMNTGAEL PVSIFDRAYV NKLATGKLSN VDNQIDATTG TIKIRAEFDN LDDKLFPNQF VNAQLLIDTL RGAVTAPVTA IQRGAPGTYV YLVGADDKVV MRKVTLGPQE GGRVAITAGL APGDRVVVDG TDRLRDGAEV SIAAIDGVAT DPPAKDQAGA TPDGKSGHGS RRHGQQPGAQ
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