Gene Msil_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0163 
Symbol 
ID7090480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp160222 
End bp160920 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID643463497 
Productprotein of unknown function DUF125 transmembrane 
Protein accessionYP_002360506 
Protein GI217976359 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGGCC GATTGCACAC TGAAGCCCAT CTTATCGACC GAATCGGCTG GCTGCGCGCC 
GCCGTCTTGG GCGCCAATGA CGGCATCATC TCTACCGCAA GCCTGATGCT GGGCGTCGCC 
TCGGCCTCGA GCGCGGCGAG CGAAGTGCTG GTGGCCGGGA TCGCCGGGCT GATCGCCGGC 
GCGATGTCGA TGGCGGCGGG CGAATATGTC TCGGTCAGTT CACAGGCCGA CACGGAGCGC 
GCCGATCTCG CGCGCGAGCG GCAGGAGCTC GCCACCGATC CTGAATTTGA AACGCGCGAG 
CTGACGCAGA TTTATGTGCG CCGCGGCGTC GATCCGGCAT TGGCGCGAAA CGTCGCCGAG 
CAGCTCATGG CGAAGGACGC CCTCGGCGCG CACGCGCGCG ACGAACTTGG AATATCCGAA 
GCCGTCACAG CAAAGCCGAT TCAGGCGGCG TTGACGTCCG CCGCGACCTT CGCGGTCGGC 
GCGGCGCTTC CAATCGCCGC CGCGCTGATC GCCCCGCCGC ACCTTTTGCA ATGGGTGGTT 
TCCGGGCTGT CTTTGATCTG CCTTGCGGGC CTTGGCGCTG TGGGCGCGAA GGTCGGCGGC 
GCCAAAATTT TGAAGCCGAC GCTCCGCGTC GCCTTTTGGG GCGCGCTGGC GATGGCGATC 
ACCGCAGGCA TCGGCGCGCT GGTCGGCCGA GCGGTCTGA
 
Protein sequence
MAGRLHTEAH LIDRIGWLRA AVLGANDGII STASLMLGVA SASSAASEVL VAGIAGLIAG 
AMSMAAGEYV SVSSQADTER ADLARERQEL ATDPEFETRE LTQIYVRRGV DPALARNVAE 
QLMAKDALGA HARDELGISE AVTAKPIQAA LTSAATFAVG AALPIAAALI APPHLLQWVV 
SGLSLICLAG LGAVGAKVGG AKILKPTLRV AFWGALAMAI TAGIGALVGR AV