| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0157 |
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| Symbol | |
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| ID | 7090474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 152578 |
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| End bp | 153201 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643463491 |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_002360500 |
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| Protein GI | 217976353 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.503776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGCAAC GCCTGATCCG TTTGAACCGC CCTGGCCTCG CGCTTGCGGC TGCGGGTTTC
GCCGCTTTGG CGCTGAGCGT CGCCGCGCGC GCGGCGGAGC AGCAGGGCAG CTCGATTCTG
CCCGGCGGCG ATTCAAAGGA GCCGATCCAT ATCGAGGCGG CCAAGCTCGA CTATTTCGAT
AAGGAGCAGA AGCTCATCTA TACCGGAAAC GTCGTCGCGA CGCAGGGCGG AAGCACGCTC
AAATCGACGA TCCTCATTTT ATATCTGACG CCGAAATCCG ATCCCGATCA GGCTGGCGTG
CCGTCCTCTT CGAGTCAGTT GCGCCGCATG GAGGCGACCG GCCCAGTGAC GATGATCACC
AAGGACCAGG TCAGCACGGG CGATCGCGGC GTCTATGAGA AGGCCGAAAA CAAGCTCTAT
CTTTACGATA ACGTGACTGT GACCCAGGGG ACCAATGTCA CCAAGGGCGA CAAAATGACC
TATGACCTCA CGACGAAAAA GGCGATCGTG ACCGGCCGCG TGAAGAGCAT GTTCCTGCCG
GAAACCACGG CGCAGAAAGA CAATTCCGCG AAAAGCGCTG CCCCGAAAGA CGACGCCGCC
AAGCCCAAGA AGCCGAAAAC TTAA
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| Protein sequence | MTQRLIRLNR PGLALAAAGF AALALSVAAR AAEQQGSSIL PGGDSKEPIH IEAAKLDYFD
KEQKLIYTGN VVATQGGSTL KSTILILYLT PKSDPDQAGV PSSSSQLRRM EATGPVTMIT
KDQVSTGDRG VYEKAENKLY LYDNVTVTQG TNVTKGDKMT YDLTTKKAIV TGRVKSMFLP
ETTAQKDNSA KSAAPKDDAA KPKKPKT
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