Gene Msil_0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0155 
Symbol 
ID7090472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp151100 
End bp151714 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content61% 
IMG OID643463489 
Product3'-5' exonuclease 
Protein accessionYP_002360498 
Protein GI217976351 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.299764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC GCCTACACAA GGGCGATCTC CCGGAGGGCG AGGCGTTTTC CGGCGCCGTT 
GCGATCGACA CCGAGACGAT GGGTCTCGTG CCCGGCCGCG ATCGGCTTTG CCTCGTTCAA 
TTGTCGCGCG GAGACGGCTC GGCTGATCTT GTCCAGATCG CGCCGGCTCA GACCGCTGCG 
CCCAATCTGA CGCGCCTGCT CGCGGACCCA GCGGTCGAGA AACTGTTCCA TTTCGCAAGG 
TTCGACATCG CTGTCCTCTA CAAAACCTTC GGCGTGATGA CCGGGCCGAT CTATTGCACC 
AAGATCGCCT CGAAACTAGC GCGGACCTAT ACGGACCGGC ACGGCCTCAA GGATCTGGCG 
CGGGAGCTGC TCGGAATCGA ACTGTCGAAA CAGCAGCAAT CTTCGGATTG GGGCGGCGAC 
ATTTTGTCCG AGGCGCAGCT TGCCTATGCG GCGTCGGACG TTTTGCATCT GCATGCCTTG 
CGAACGAAGC TTGACGCCAT GCTCGAGCGA GAGGGGCGCA GGGCGCTCGC CGAGGCGTCA 
TTCGCCTTTT TGCCGACCCG GGCGAAGCTC GATTTGATGG GCTGGGGCGA TTCGGATATT 
TTTTCGCACC AATGA
 
Protein sequence
MTIRLHKGDL PEGEAFSGAV AIDTETMGLV PGRDRLCLVQ LSRGDGSADL VQIAPAQTAA 
PNLTRLLADP AVEKLFHFAR FDIAVLYKTF GVMTGPIYCT KIASKLARTY TDRHGLKDLA 
RELLGIELSK QQQSSDWGGD ILSEAQLAYA ASDVLHLHAL RTKLDAMLER EGRRALAEAS 
FAFLPTRAKL DLMGWGDSDI FSHQ