Gene Msil_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0141 
Symbol 
ID7090457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp138057 
End bp138755 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID643463475 
Productphosphatidylserine decarboxylase related protein 
Protein accessionYP_002360485 
Protein GI217976338 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA TCGAATCCAT TCGCAAGCAG GTCACGCCGA TCCACCCCGA AGGCTATGTG 
TTCATCGCCT CCTTCGGGGT CGCAACGCTG GTGCTCGGCT CATTTTTCAG CCCGCTCGGC
TGGATCGGCG CCTTTGCGAC CGCCTGGTGC GCCTATTTCT TCCGCGATCC GGTGCGGCAG
ACCCCGCTCG ACGAGGGCCT GGTGATCTCG CCCGCCGACG GCGTGATCTC GGCCGTAGGG
TTTTTCCCGC CGCCGCCGGA GCTTGGCCTT GGCGTTGAGC CGCTGCAGCG CATTTCCGTC
TTCATGTCGG TGTTCGATTG CCACGTCAAT CGCGCCCCCG TGGCGGGCCG CATCGTCAAG
ATCGCCTATA AGCCCGGCTT GTTCCTCAAC GCCGACCTCG ACAAGGCGAG CGAGGACAAT
GAACGCAACG GCCTCGTGAT CGAGACCGCG GCCGGCCGCT TCGGCGTCGT GCAGATTGCT
GGCCTCGTCG CGCGGCGCAT CGTTTGTTTC GTCCGGCAGG GCGAGTCGAT CGGGGTCGGC
GACCGCATCG GGCTGATCCG TTTCGGCTCG CGCGTCGATG TCTACCTGCC GGGGACGGCG
CGCGCGCTGG TGACGGTTGG CTCAAAAGCC GTCGCCGGTG AAACTGTGCT GGCCGAACTG
CGCGCCGGCG CGAACCGGCG AGCATTCAAG TCGAGTTAG
 
Protein sequence
MSLIESIRKQ VTPIHPEGYV FIASFGVATL VLGSFFSPLG WIGAFATAWC AYFFRDPVRQ 
TPLDEGLVIS PADGVISAVG FFPPPPELGL GVEPLQRISV FMSVFDCHVN RAPVAGRIVK
IAYKPGLFLN ADLDKASEDN ERNGLVIETA AGRFGVVQIA GLVARRIVCF VRQGESIGVG
DRIGLIRFGS RVDVYLPGTA RALVTVGSKA VAGETVLAEL RAGANRRAFK SS