Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0118 |
Symbol | |
ID | 7090435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 112792 |
End bp | 113490 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643463452 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002360462 |
Protein GI | 217976315 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGT CTCTCGCAAT CCCGCCGCTG CTGGTCTTCG ACCTCGACGG CACGCTGGCC GACACCGCGG CCGACCTCGT CTCGACCCTG AACGCCATCT TGACCCAAGA AGGACTGGCG GCCGTCTCTT TCAAGGACGC GCGCGCAATG GTCGGCGCCG GAGCCAAGGC GCTGCTGCAG CGGGGGCTCA AGGCAAATGA CGTCGTCGTC GAAGAAGAGC GGCTCGATCA ATTATTCGCC GACTATCTCG ATCATTACGA GGCGCATATC GCCGATGAGA GCGTGCTCTA TCCAGGCGTG ACCGCCGCGC TCGACCGTTT CGAGGCGGCC GGCTGGAACT TTGCCGTCTG CACCAATAAA TTCGAGGCGC CCTCGCGCCT GCTCTTGACC GCCCTCGGCA TCGCCGACCG GTTCAAGGCG ATCTGCGGCA AGGACACATT CGCAGTGAGC AAGCCGGAAG GCGACGCTCT GCTGCAGACG ATCGCCAAAG CCGGCGGCGA TCCGCGCCGT GCGATTATGG TCGGCGATTC CAAGACCGAT ATCGACACGG CCCATAACGC CAAGGTTCCG GTCGTGGCCG TCACCTTCGG TTATACGGAT CTGCCGGTCG AAACGTTCGA GCCGGATCGG ATCATCGGCC ATTTCGACGC GCTTTGGGAC GCGGTCGAAG AGATTTCCGC CGTCTTCCAC GTCGCCTGA
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Protein sequence | MNKSLAIPPL LVFDLDGTLA DTAADLVSTL NAILTQEGLA AVSFKDARAM VGAGAKALLQ RGLKANDVVV EEERLDQLFA DYLDHYEAHI ADESVLYPGV TAALDRFEAA GWNFAVCTNK FEAPSRLLLT ALGIADRFKA ICGKDTFAVS KPEGDALLQT IAKAGGDPRR AIMVGDSKTD IDTAHNAKVP VVAVTFGYTD LPVETFEPDR IIGHFDALWD AVEEISAVFH VA
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