| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0077 |
|---|
| Symbol | |
|---|
| ID | 7090392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 67497 |
|---|
| End bp | 69890 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643463410 |
|---|
| Product | putative membrane transporter |
|---|
| Protein accession | YP_002360422 |
|---|
| Protein GI | 217976275 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.273508 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC AAGGACAAAA GGAGCACGCG GCCGATCTGA ACCTCGCCTC TTCGAGCGTC
GGCAAGCGCG CGGGGTTGGC GCTTGGGATC GAGCGGACCG GGCTGATCTC GCTGCGCTAT
CCTCTGTTTG TCGCGCTTGC GGCGCTGGCG CTCGTGATCG CGGCCGGGTT TGGGCTGACG
CGGCTCAAGG TCGATGATTC GTTGAGCCAG CTGTTTCGCT CCAATACGCC TGAGTTCCGG
CAATATGAGG AAGTGACGCG GAAATTCCCG TCGAGCGAAT ATGACGTGCT CGCCGTGATC
GAAGGGCCAA GTCTGCTCGA GCGAGACTCG CTCGACAAGC TCCGCAATTT CGTCACCGAC
GTGCAGCTGA TCGACGGCGT TCAAGGCGTG ATCTCGCTTT ATTCGGCGCG CCAGCCGCCG
GAAAACGGCG ATACGCCGGC GCCGCTCTTC CCCGACCCGC TGCCGGAGGG CGCCGCTTAC
GACGCCCTTG TGAAGCGCGT CATGAGCAAT GAGATCATCC GCGGCAAGAT CCTCTCGGAA
GACGGTCAGC TGACCCTTGT CGTTCTGGCG CTCGATCCGA AAATCGTCGG CGGCAAGGGG
CTCGACGCCG CCGTCGGCGA GATCCGCAAG ACGATGGCCG AGGATCTGGA TAGGACCGGC
CTCAAGGCGG AGCTTTCCGG CGTTCCGGTC ATGCAGCTCG AAATCCGCAC CGCGGTGGAG
CGCGATCGTC TTGTCTATAA TGCGACCGGC TTCATCGCCG GCTGCCTGAT CGCCATTCTG
TTTTTTCGCC GTCTGTCCTT CATGGTGATT GCGGCGGGGC CGCCGCTGCT CGCGATCATT
CTCGCCCTTG GGACGCTCGG CTGGCTCGAT TTCCGGTTGA ACATGTTCCT GAACGTGATG
ACGCCGCTCA TCATGGTCAT CAGCTTCTCC GACAGCATGC AGCTGACCTT TGCGACGCGC
GACCGAATCC TCGCCGGCCA GAGCAAGCAG GAAGCGCTGC GCAACGCCAT TTTGATCGTC
GGCCCGGCCT GCGTCCTGAC CCACGCCACC GCGGCGTTGT CCTTTGTCGC GCTGCTGTTT
TCCGATTCCG AGCTGATCCG CACCTTCGGG GAGGCGGGAC TGATCGCGAC GCTGATCGCC
CTCTTCACGG TTCTGCTGCT GCTGCCGCTG CTTGGCATGC TTTTGCTGCG CAACGAGGCG
AGGTTGGCCG CGACAGGTCG GCGCGGCGAT CTTGGCGTCG AGGCGCTGCG CGCCTTCTGT
TTCTGGATCG CCGCCCGCAT GGTGCGCCAT CCCGGCCTCT ATAGCCTGGT CGGGCTGATC
GTGGTCGCGG CCCTTGGCGC CGTCTTCGGC AATCTGGAGC CGCGCTATCG TCTGGCCGAC
CAGGTCCCCG ACAAGGAGCA GGCGGTCTCG GCGAGCGGGC GCCTCGACGC CAAGCTGACC
GGCGCCAATC CGATCGACGT CCTGATCGAA TTTCCGCAGG GCGCCTCGCT CTATGCCCCG
GAAACGCTCG CCGTCATCGC CAAGACGCAC AGCCTGCTCG AACATCAAAA GGGCGTCGGC
AATGTGTGGT CGCTCGAAAC GCTGCGCCGC TGGCTGCAGG ACAAGATGGG CGCCTCTGAC
GTCGGCACTT TGAAAAAATA TGTCGATCTT CTACCCGAGC ATCTGACGCA GCGCTTCATC
GACGCCAAGC GGGACGCCGT CGTCGTCTCG GGCCGCGTGC CGGACGCCGA CGCCAGCAAA
TTGCTGCCGG TGGTCGATGC GGTCGATCAG TCGCTGCAAA GCCTGCGCGC GGCCTACCCC
GGCTACACGA TTTCGGTGAC CGGCCTCTCA GCGATCGCCG CGCGCAATAG CGCCAGCATG
ATCGACAAGC TGACGCGCGG CCTCACAATC GAATTCTTCT TTGTCGCCGC CTTTATTGGG
CTGGCGTTCC GCTCGGTCGT CGTCGGGCTC GCCTGCGTGC TGCCGGGCAT TTTTCCTGTC
GTCGCCTCGG GCGCCCTCCT CGCGATCACA GGGCAGGGGC TTCAATTCGC CAGCGTCGTC
GCGCTTACCG TGTCCTTCGG CCTCGGCCTC AGCGCGACGA TTCATTTCCT GAACCGGCTC
CGGATCGAAG GCGATTCCGG CGAGAATTAT GCGCTTGCCG TCGAGCAGGC GACAGTCCTC
GTCGGTCCGG CGTTGATCTT GACCTCGATC GTGCTGGCCT GCGGCCTTGC GGTGACGGTC
TTTTCCGACC TGCCCTCGCT GCGCCTGTTC GGTTGGCTCA GCGCCTTTGC GATGATGGCG
GCGCTCACCG CCGATTTGCT GATTCTACGG CCGACCGCGA TGTTCCTGCA CAGCGCCGCC
GAGCGTTTGG CGGCGTGGCG GCGCGGCGGC GCCGCGGGCG CGGCGCCGCG ATAG
|
|---|
| Protein sequence | MTDQGQKEHA ADLNLASSSV GKRAGLALGI ERTGLISLRY PLFVALAALA LVIAAGFGLT
RLKVDDSLSQ LFRSNTPEFR QYEEVTRKFP SSEYDVLAVI EGPSLLERDS LDKLRNFVTD
VQLIDGVQGV ISLYSARQPP ENGDTPAPLF PDPLPEGAAY DALVKRVMSN EIIRGKILSE
DGQLTLVVLA LDPKIVGGKG LDAAVGEIRK TMAEDLDRTG LKAELSGVPV MQLEIRTAVE
RDRLVYNATG FIAGCLIAIL FFRRLSFMVI AAGPPLLAII LALGTLGWLD FRLNMFLNVM
TPLIMVISFS DSMQLTFATR DRILAGQSKQ EALRNAILIV GPACVLTHAT AALSFVALLF
SDSELIRTFG EAGLIATLIA LFTVLLLLPL LGMLLLRNEA RLAATGRRGD LGVEALRAFC
FWIAARMVRH PGLYSLVGLI VVAALGAVFG NLEPRYRLAD QVPDKEQAVS ASGRLDAKLT
GANPIDVLIE FPQGASLYAP ETLAVIAKTH SLLEHQKGVG NVWSLETLRR WLQDKMGASD
VGTLKKYVDL LPEHLTQRFI DAKRDAVVVS GRVPDADASK LLPVVDAVDQ SLQSLRAAYP
GYTISVTGLS AIAARNSASM IDKLTRGLTI EFFFVAAFIG LAFRSVVVGL ACVLPGIFPV
VASGALLAIT GQGLQFASVV ALTVSFGLGL SATIHFLNRL RIEGDSGENY ALAVEQATVL
VGPALILTSI VLACGLAVTV FSDLPSLRLF GWLSAFAMMA ALTADLLILR PTAMFLHSAA
ERLAAWRRGG AAGAAPR
|
|---|
| |