Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0010 |
Symbol | |
ID | 7092338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 9174 |
End bp | 10016 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643463344 |
Product | ABC-2 type transporter |
Protein accession | YP_002360356 |
Protein GI | 217976209 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTC AGTCCGCCGC GCCCGCCGAA CCCCGGGGCT TCAGCCTTGT CCAATATGCG GTCTGCCTCA AAGGAATCGT CTGGCGCGAG GCGCTACGGT TCCTGCATCA ACGTGAGCGT TTCGTCTCGG CGCTGGTGCG GCCCCTGGTC TGGCTGTTCA TTTTCGCCGC GGGCTTTCGC TCCGTGCTCG GCGTCTCGAT CATTCCGCCA TACGAAACCT ATGTGCTCTA CGACGTCTAC ATCACGCCGG GGCTCATCGC GATGATCCAG CTTTTCAACG GGATGCAATC GTCGCTGTCG ATGGTTTATG ATCGAGAGAT GGGCAATATG CGCACGCTGC TGGTCAGCCC GCTGCCGCGC TGGTACCTCT TAACGTCAAA GCTCGTCGCC GGCGCCTCGG TGTCGATCTT GCAGGTCTAC GCCTTCCTGT TGATCGCCTG GTTCTGGGAG ATCGAGCCGC CGACGCTTTG GGGCTATCTG ACTATTTTGC CTGCGTTGAT TCTGTCGGGC CTGATGTTCG GCGCGCTCGG GATGTTGCTG TCCTCGCTGA TTCGCCAGCT GGAGAATTTT GCGGGCGTGA TGAATTTCGT CATCTTCCCG ATGTTCTTCG CCTCAAGCGC GCTCTATCCG TTATGGCGCG TCAGGGAGGG CAGCCCGTGG CTCGCCTTCG TTTGCGAGAT CAACCCGTTT ACGCATGCCG TCGAATTGAT CCGCTTCGCC TTCTGGGGGC AGGTCAATTT TACGTCATTG GCGGTGGTCG CCGGATGCGC CGCGCTGTTC CTCGGCGCCG CCATCATCGC CTATGATCCC TCGCGCGGCA TGTTGATGCG GCGCGAGGGT TAG
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Protein sequence | MSVQSAAPAE PRGFSLVQYA VCLKGIVWRE ALRFLHQRER FVSALVRPLV WLFIFAAGFR SVLGVSIIPP YETYVLYDVY ITPGLIAMIQ LFNGMQSSLS MVYDREMGNM RTLLVSPLPR WYLLTSKLVA GASVSILQVY AFLLIAWFWE IEPPTLWGYL TILPALILSG LMFGALGMLL SSLIRQLENF AGVMNFVIFP MFFASSALYP LWRVREGSPW LAFVCEINPF THAVELIRFA FWGQVNFTSL AVVAGCAALF LGAAIIAYDP SRGMLMRREG
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