Gene Msil_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0010 
Symbol 
ID7092338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp9174 
End bp10016 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content60% 
IMG OID643463344 
ProductABC-2 type transporter 
Protein accessionYP_002360356 
Protein GI217976209 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTC AGTCCGCCGC GCCCGCCGAA CCCCGGGGCT TCAGCCTTGT CCAATATGCG 
GTCTGCCTCA AAGGAATCGT CTGGCGCGAG GCGCTACGGT TCCTGCATCA ACGTGAGCGT
TTCGTCTCGG CGCTGGTGCG GCCCCTGGTC TGGCTGTTCA TTTTCGCCGC GGGCTTTCGC
TCCGTGCTCG GCGTCTCGAT CATTCCGCCA TACGAAACCT ATGTGCTCTA CGACGTCTAC
ATCACGCCGG GGCTCATCGC GATGATCCAG CTTTTCAACG GGATGCAATC GTCGCTGTCG
ATGGTTTATG ATCGAGAGAT GGGCAATATG CGCACGCTGC TGGTCAGCCC GCTGCCGCGC
TGGTACCTCT TAACGTCAAA GCTCGTCGCC GGCGCCTCGG TGTCGATCTT GCAGGTCTAC
GCCTTCCTGT TGATCGCCTG GTTCTGGGAG ATCGAGCCGC CGACGCTTTG GGGCTATCTG
ACTATTTTGC CTGCGTTGAT TCTGTCGGGC CTGATGTTCG GCGCGCTCGG GATGTTGCTG
TCCTCGCTGA TTCGCCAGCT GGAGAATTTT GCGGGCGTGA TGAATTTCGT CATCTTCCCG
ATGTTCTTCG CCTCAAGCGC GCTCTATCCG TTATGGCGCG TCAGGGAGGG CAGCCCGTGG
CTCGCCTTCG TTTGCGAGAT CAACCCGTTT ACGCATGCCG TCGAATTGAT CCGCTTCGCC
TTCTGGGGGC AGGTCAATTT TACGTCATTG GCGGTGGTCG CCGGATGCGC CGCGCTGTTC
CTCGGCGCCG CCATCATCGC CTATGATCCC TCGCGCGGCA TGTTGATGCG GCGCGAGGGT
TAG
 
Protein sequence
MSVQSAAPAE PRGFSLVQYA VCLKGIVWRE ALRFLHQRER FVSALVRPLV WLFIFAAGFR 
SVLGVSIIPP YETYVLYDVY ITPGLIAMIQ LFNGMQSSLS MVYDREMGNM RTLLVSPLPR
WYLLTSKLVA GASVSILQVY AFLLIAWFWE IEPPTLWGYL TILPALILSG LMFGALGMLL
SSLIRQLENF AGVMNFVIFP MFFASSALYP LWRVREGSPW LAFVCEINPF THAVELIRFA
FWGQVNFTSL AVVAGCAALF LGAAIIAYDP SRGMLMRREG