| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4517 |
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| Symbol | |
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| ID | 7090262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011665 |
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| Strand | + |
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| Start bp | 39473 |
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| End bp | 45433 |
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| Gene Length | 5961 bp |
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| Protein Length | 1986 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643463321 |
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| Product | conjugative transfer relaxase protein TraI |
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| Protein accession | YP_002360333 |
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| Protein GI | 217975734 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family
[TIGR02760] conjugative transfer relaxase protein TraI |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCA TCAGTCCCAT TGCGTCGAGC GCTGGCGGCG CGGCCAGCTA CTACCTCAGT
GAAGAAAAGA ACCTCAATTT GCCTGACGTG TCGTTAGAAA AAGCAGCGGA CGCCAAAGAA
GGGGAAACCA ACTATTACTT GAAAGAGCAG AGCGCCGAGC CCAATACCCA ATGGTATGGC
AAACTGGCAG AGCAAGAGGG AATGCTAGGC AAGCCCGTTG AAGAGCATCA ACTCAAAGAG
GTGTTAGCCG GTAGCCTGAA CGACCAAACG CTTAAAACCC AAAACAGCAA CGCCCGCAAC
GGTTTTGACT TTACCTTTTC GGCGCCTAAA TCCGTCAGTT TACTTGCACT CGTGGGCGGC
GATAAACGCT TAATGACAGC GCACGATGAC GCGGTAAAAT TCGCGTTATC GCATATCGAG
AAAGATGCGG CGCAGGCCAG ACAAACTAAC CCTGATACCA AAGCGACCTC TTTTGAAAAC
ACGGGCAATT TGCTGTTTGC AATGGTGCGT CACAAAACCA GCCGTGAAGA AGATCCGCAG
TTGCACACCC ACTCACTCAC CGCCAACATG ACCAAGGACA GCGAGGGCAC ATTGCGCGCG
CTGGCAAGCA GCTTTAAACA AAAAGGCGGC ATCATCAATG GCACGGGTGA GCGGGTTTAT
AACCATCAAA AATACTATAC CTCGCTGTAT CAAAGCGCCT TAGCCCGCAG TGTTGAACAA
GCGGGTTATC AAACTCGTTC ACTGGGTAAT AATTTGTTTG AAGTGGAAGG TGTCCCGCAG
TCCTTACTCG ATACATTTTC AACCCGTAGC CAGCAAATCA ACGAACAAAC CCAAAGCTTA
GGTTTAGACT CACAAGCCGC GCGGGACGTC GCCGCAAAGG ACACCCGCAA GAGTAAAGCC
TATACCAGCG AAGCCACCTT GTTTGAGCAA TGGAAAAACA AAGCCAATAA CAGCGGCTTT
AACCTGACAG GCTTTGTAAC AAACAGCATG TCACGAGAAA CATCACTCAA TGCGTTAGCG
CTCAAACCCG CTGCTATCGA TGCGGTGAGT CGCGCGATTG AGCACGCCAG TAACACCCAA
AACCGTTTTA ATTACGCGAA ATTAGTGGAA TCCGCCACGC TTGAATTTAC GCAAGGCCAG
AAGCTCGATG CGCTCGATAT TAAATTGGCA CTCGATAAGC ACATTGAAGA TGGCGCACTC
ATTCCGCTTG ATAAAGAGTC TGCGACCTTT ACCAGCGCTG CCCACCTCAA AGCCGAAACC
AACCTGCTAG AGAGCATCAA GCCAAAAACG GCCAACATGC GCCAAGTGGT CGATACCAAC
ACGCTTCAAG GCAAAGGCTT AAATGCGGAC AACCAAAAGA AAGTCTCTGA ACTGTTCGCC
AGTACCAAAC AAGTTAACCT AGTGAACGTC TTTGGTAGCA GTGAACAGCT CGCAACCGCC
CTATTAAATG TCGGTGAGGC CAACGGTAAA CGTATTCACA TCATTACCCC TGACATGAAA
AGCAAACTGC ACACCAGTGA ACGGGTGCAA CGGGACTCAT CGACTATTGG CAAGTGGATA
ATGAACCACT TCAAACCTGA CCACACCCAT ACACTCAGCA GCTTTACTAA AACGGCCAAC
AACACTAACC GCGATATTTT AGTGGTTGAG AACGCCCATA AACTCGGCCT TAACGACTTT
AATGCCCTGC TCGCGCAAGC CAAAGCGGGC AACAGTAAAG TGATTTTGCT CAATCACGCC
AATGCCAAGC AAGGCATGAA AGCCGGTAAC GCTATCGAGG TACTTAAAAA AGGCAACGTA
AACGAAAGCA ACTGGGTCGC CACCAAACAA AGCAACACCG CCATGCGACT GCATGAAAGC
AAAGACAGTG ACAGGGTTAA CCTGATTGCA AAAACTTACG CGCAACTGCC CGAGAAGCAA
CACACCCAAG TCATTACGGG CACCCATAAA GATGTGAAGC AACTCAACAG CGCCATTCGC
GCTGAATTGC AAAATCAAGG TGATGTATCG CGCCTTGGGC TCAACATCCC TACCCTTAAT
CCCGTGTTCT TATCCGCGCA GCAACGGGAA GTCGTCGGCC AGTACACCAA GGGCATGGTA
CTCACCCAAT GGCAAAAAGT CGGTGGCCGC AATCAACAGC AGCAATTGAC GGTGGACAGC
GTTAACCGTG ATAACAACAC CCTCACGCTG ATAGACAAAA ACGGTAAAGC GTCCGAGATT
AACCCCAGCA GCAAAGCCTT TAAAGCCGCA GAGTACGCGA TCGCTAAACC GGACTATTTA
CATATCGCCA ATGGCGACAA ACTCATCATG GCCACAAACC ATCAAGACAG TGGTTTGAGC
AAACAAATTT ATACGATCAA CGCCCTGTCC AAAGAATGGG TCACGCTCAA AGACGAAAGC
GGCAAACAGC ACAGCGTTAA AGCCAGTGCA TTGCACCATG CGCCGCTCAA TCATGGTTAC
GCCACCACGC CAAGCAATGC CAGCCCTAAT GCAAGTCACC ACATCGTCAA CATTAAAGCC
TATAGCGCCT CAAAAGAGTG GTTACATGAC ACGCTGACAC AAGGCATCAA ACACATCGAT
ATATTCACCG ACAAGGCACA ACAATTTGAT GACCGACTAG AAAAAAGTGA GGTGAAACCA
TCCAGTATTT CGCGCATCAT GCAAGCCGCT GACATGCCAG AAAAGTTCGT GAATAGCCAA
ACCACGGCCC TGCTCACCCA AGATGTGACC GCAGCACTGA ATGCCATTGG TGCCCAGCAT
CAAGACAAAG GGCTTATTCA CAATGCCGTG GATTTTGCCA TCCAGCACAT TAGCGAGAAA
GAAGCCGGTT ACTCACAAAA AGAACTGATT GTTAATGCGA TCAAGTACGC CTTTGAGGAA
AAAGGCACCA GCATTACCCA ACATGAAATC ATCAACACCC TGCAACACAT GGCCACGAAC
AGCACGGATA AAGGCGCGCC CTCACTCCTG AGCGCCGAAT ACCACGACGG CACCCGCTGG
ACAACCCAAG CCGCTATCGA TACCGAAGTG CGTATTTTAG ACAGACTGCA AGCGGGCAAA
GATCAACTTG CGCCCCTTAC CAGCGTTGAA CACGCCGCGC AGGTACTCAG TCAAAATCAA
AACCTGACCG ATGGCCAAAA AGACGCGACC TTGCTTATCA CCACCACCAA AGACCGATTT
GTGGGTGTTC AAGGGTTAGC GGGAACGGGT AAATCGACCA TGCTTGAAAC GGGTATCGAT
CTCGTTAAAC AAAGCGAATC CATTCTCAAC ACACAACCCA ATAAGACACC GACACAATTC
ATAGGTCTAG CGCCGACACA CGCCGCCGTT AACGAACTCA AAGACAAGAA CGTCGAAAGC
CAAACGGTTC AATCACTCCT AAGCAACTTT TTAAGCCAAG ATGCGAAACC GGACCAATAC
GCCAACACAG TGTTCTTGCT CGATGAGTCC TCGATGACCA GTAACGCCCA AATGGATAAA
TTTACCCATT TGATTGAGAC AACAGGCGCG CGCGCCGTGT TCTTGGGTGA CACTAAACAG
TTAACGTCCC AAGAAGCGGG TAAACCTTTT GAACTTGCGT TAAACAAAGG CGCAATCAAT
AGCGTCACCA TGAAAGACAT TGTGCGCCAA CAGAACAGCA CGCTACTGAG TGCAGTACAC
AATATTGTCG ATCGCCAAGG CGAAAGTGCT ATTGATAAAA TTCAGCAACA ATTACCCTTT
GACCAATACA CCGCGCCCAC TGCGAACGAC GCGGTAACGC CCGAAAAGCA GGCTACCGCT
AACATCAATC AAAGCTTGAA TATCATTTCA ACTTTGCAGT TGATAACCGA TAACCCGAAG
AAAAACCAGC AACTGGCGAC CGAAGCCCTG CCCGCCACGG TGGCACTGGA ATACTTGGCC
AGAACACCTA AAGCGCGTGA AAATACCCTT ATCATTGCGT ACACCAACAA GGAACGCGAC
GACATTACCC ACGAAATCCG CCAAGGGTTA CAGCAACAAA AAAGCCTCAG TAACGAGCAA
TTCACTGTAC CGAGATTACG TGGAGTCCAT GCCAGCAAGG CCGAACTGGC GACCATGTTG
CCCTATCAGC AGGGGTTAAT CCTGACGACC AGTAAAGACA GTTATTTTGA AATTATGAAG
GTCGATAAGC GCAATAACAT GCTCACCCTC GCGGATATGA AAACCGGCGA GGAAAAGCAT
TTCTTTCCCA AAAATCATGG CCACAAATTT ACGAACCTTT GGGCTAAGAG TGAGCAACCT
CTCGCAGAAG GCGACAGTAT CATGCTCCGC AAAAGCGATA TTGACCGTGA AATGCAGGGC
AACAAAACCT ATACCGTTAG CAGCATTGAC GATAAACAAA TGCAGCTCAA ATCCACGGAT
AACCACACAT TAACGCTCTC AACCAAAGAG TTGAAAGATG CTCATTGGGA TTACGCATAC
ACCCGCACCG CCGATATGGC GCAAGGGGCA ACCTATGAGA ATGTCATTAC TGCGATTAAG
GGCCAAGGTG CATTAACTAA CGTAAGGCGC GCGTATATCG ATATCACCCG TGCCAGTAAG
CACGTAAAAA TCATCACCGA TAACCCGCAA AAAATGATGC TCTCATGGGT CAATAACGAT
CCCAATAAAG TCTCTGCACT TGAGACAAGA GATAACTATT ACCCTGAACA TACCCCGCTA
TTTAATGACA AACCCTTGCC GCAGGAAAAC CCCAAGTACC TCGATGTGAA TGGATATGTG
GATCTAAAAC GGATGGCCAC CGAGCTAAAT GCCAAGCTTC CAGCCTACAG TGAATCACTG
GCAACGCAGC TTTTAGGTGA GCCGAACCGC GATAAATCAG ACAAAGATAA CCTGACATTT
GGCAAAGAAG GGAGCCTAAC ATTGACCACA ACAGGCCAAT ATCGTGGCTA TTTTAAAGAC
TGGAAAACCG GCGATAAAGG CACCCTAATT AACCTGATTA TGGTCGCTGA AAAATGCAGT
TATAAAGATG CGCTTTATAA AGCCGATAAA ATGATGAACG AACCCGATAA ATATAATCTG
GTGAAAAACC CACAGCATGA TGAACTAACA CATGCCATTC CGGTTAAGCA AAGCCAATTA
GAAGCGCGCG CGAAGCAATA CTTTAACGAA GCTAAACCTA TAGAAAACTC ACTCGCACAA
ACCTATTTAG CCAAGCAAGG AATCGAGGTT ACGAAGCATG AAAACTTACG TTTTCACGAT
GCCGTTTATT CGTCAGAAAA ACGTGGAACC TTCCCCGCAT TAATCGCGAA CATCACCAAT
GATAAGGATG AGACTAAGGC AGTAGAAATT ACTTACCTTG ATAAATCCAG CGGTGACATT
GCAGCGCTAA AAATAAATAA GCGCATACTC GGCTCCAAAT CGGGGAACAG CACGACGATC
AACAAAGGCA ATAATTCAGA CTATAGTATT GTCGCTGTCG GCGTAGAGAA TGCGCTTAAG
ATAAATGCTG ACAATAAAAA CGGGGCTGAC GTTATTGCGC TAAACAATAA TAATGACACT
AAAACATTCA ATACAAATGA ATTGCGCGAA AACGTGATAG TGGTACTTGA TACCAATAAT
TCACAAGACA CTGCAAAACT GGCAAGTGAC CTTACGGATA AATTCAGCAA GGAAAATATA
CATGCGGTTA TTATTGAACC CAATCTGATA CCTGACGGCT TAAACAAAGT CGAAACGACA
AAGCAATTAG TCAACGAAGC AGTCTATAGC ATCACGACAA AAGACAACAC CCTATCTAAA
GCCATTCAAT CACTGAGTAA TGACATTGCA GGTACGAAAA ATATCACGAT GAAAGATGAC
AGCAATAACG TAGCGACGAA TAAAACAAAG CATGATGAAC ACTATCAACA TTTAGCAATG
GATAGCCACC GTTCACCCAC GAAAGAACAT AGCCCCAATA TCGAAAACCC TAAATTGGAT
ATTGGTGAAA AGACTATGTA A
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| Protein sequence | MLSISPIASS AGGAASYYLS EEKNLNLPDV SLEKAADAKE GETNYYLKEQ SAEPNTQWYG
KLAEQEGMLG KPVEEHQLKE VLAGSLNDQT LKTQNSNARN GFDFTFSAPK SVSLLALVGG
DKRLMTAHDD AVKFALSHIE KDAAQARQTN PDTKATSFEN TGNLLFAMVR HKTSREEDPQ
LHTHSLTANM TKDSEGTLRA LASSFKQKGG IINGTGERVY NHQKYYTSLY QSALARSVEQ
AGYQTRSLGN NLFEVEGVPQ SLLDTFSTRS QQINEQTQSL GLDSQAARDV AAKDTRKSKA
YTSEATLFEQ WKNKANNSGF NLTGFVTNSM SRETSLNALA LKPAAIDAVS RAIEHASNTQ
NRFNYAKLVE SATLEFTQGQ KLDALDIKLA LDKHIEDGAL IPLDKESATF TSAAHLKAET
NLLESIKPKT ANMRQVVDTN TLQGKGLNAD NQKKVSELFA STKQVNLVNV FGSSEQLATA
LLNVGEANGK RIHIITPDMK SKLHTSERVQ RDSSTIGKWI MNHFKPDHTH TLSSFTKTAN
NTNRDILVVE NAHKLGLNDF NALLAQAKAG NSKVILLNHA NAKQGMKAGN AIEVLKKGNV
NESNWVATKQ SNTAMRLHES KDSDRVNLIA KTYAQLPEKQ HTQVITGTHK DVKQLNSAIR
AELQNQGDVS RLGLNIPTLN PVFLSAQQRE VVGQYTKGMV LTQWQKVGGR NQQQQLTVDS
VNRDNNTLTL IDKNGKASEI NPSSKAFKAA EYAIAKPDYL HIANGDKLIM ATNHQDSGLS
KQIYTINALS KEWVTLKDES GKQHSVKASA LHHAPLNHGY ATTPSNASPN ASHHIVNIKA
YSASKEWLHD TLTQGIKHID IFTDKAQQFD DRLEKSEVKP SSISRIMQAA DMPEKFVNSQ
TTALLTQDVT AALNAIGAQH QDKGLIHNAV DFAIQHISEK EAGYSQKELI VNAIKYAFEE
KGTSITQHEI INTLQHMATN STDKGAPSLL SAEYHDGTRW TTQAAIDTEV RILDRLQAGK
DQLAPLTSVE HAAQVLSQNQ NLTDGQKDAT LLITTTKDRF VGVQGLAGTG KSTMLETGID
LVKQSESILN TQPNKTPTQF IGLAPTHAAV NELKDKNVES QTVQSLLSNF LSQDAKPDQY
ANTVFLLDES SMTSNAQMDK FTHLIETTGA RAVFLGDTKQ LTSQEAGKPF ELALNKGAIN
SVTMKDIVRQ QNSTLLSAVH NIVDRQGESA IDKIQQQLPF DQYTAPTAND AVTPEKQATA
NINQSLNIIS TLQLITDNPK KNQQLATEAL PATVALEYLA RTPKARENTL IIAYTNKERD
DITHEIRQGL QQQKSLSNEQ FTVPRLRGVH ASKAELATML PYQQGLILTT SKDSYFEIMK
VDKRNNMLTL ADMKTGEEKH FFPKNHGHKF TNLWAKSEQP LAEGDSIMLR KSDIDREMQG
NKTYTVSSID DKQMQLKSTD NHTLTLSTKE LKDAHWDYAY TRTADMAQGA TYENVITAIK
GQGALTNVRR AYIDITRASK HVKIITDNPQ KMMLSWVNND PNKVSALETR DNYYPEHTPL
FNDKPLPQEN PKYLDVNGYV DLKRMATELN AKLPAYSESL ATQLLGEPNR DKSDKDNLTF
GKEGSLTLTT TGQYRGYFKD WKTGDKGTLI NLIMVAEKCS YKDALYKADK MMNEPDKYNL
VKNPQHDELT HAIPVKQSQL EARAKQYFNE AKPIENSLAQ TYLAKQGIEV TKHENLRFHD
AVYSSEKRGT FPALIANITN DKDETKAVEI TYLDKSSGDI AALKINKRIL GSKSGNSTTI
NKGNNSDYSI VAVGVENALK INADNKNGAD VIALNNNNDT KTFNTNELRE NVIVVLDTNN
SQDTAKLASD LTDKFSKENI HAVIIEPNLI PDGLNKVETT KQLVNEAVYS ITTKDNTLSK
AIQSLSNDIA GTKNITMKDD SNNVATNKTK HDEHYQHLAM DSHRSPTKEH SPNIENPKLD
IGEKTM
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