| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4508 |
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| Symbol | |
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| ID | 7090253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011665 |
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| Strand | + |
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| Start bp | 30041 |
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| End bp | 30916 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643463312 |
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| Product | type-F conjugative transfer system pilin assembly protein TraF |
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| Protein accession | YP_002360324 |
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| Protein GI | 217975725 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02739] type-F conjugative transfer system pilin assembly protein TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 109 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGT GGTTAAATGA CCGCTTACAA CATGCCGCAG TATCTCCTTT TTTTCGGTGG
TCAAGCCGCG CGCCGTTGGC GTGGTTGTCC ACAAAAAAAG GGGATGCGGT GGTCAACAAG
CGCAGCGCGT TAGTGCTCCT TATGCTGACA ACGTTTTGCC TCGGCGCAAA CGCCACGGAT
GCACAAGGCT GGCGCTGGTA TAACGAACCG ACCGCCCCCA AGAAGCAAGC ACCTAAAAAG
GCCGAAACGC CAAGCGTCAC ACTCACGCGC ACCCAAACAC TGACGCCCAC AGAGCAGATG
GATTGGTTTC ACAGCTACTA CCAAGACACG CTCAATGACG CGGCGATAAA CAGCCAAGAC
AGCAAGAAAG TGGAAAGGGC CATGCTGCTT AATCAGTACG TCAGCAATAA ATCCTCAGAG
TTCGGCATGA CCTTTAAAAA GGTCCTGCTA GATAACCCTG AGCTGTCTTA CACCAAAGAT
AGACCGACGG AACAAGCGGC AAGAAGCACC TATTTATCAT TAGAGCGCAA CAAGAAGATG
CGCGCAGTAC GCAGCCTTGC CGATGCGGGA TGGGGGCTGT TCTTTGTCTA CAAAGGCCAA
GAAGAAATGG ATATTGCGCT AGCGCCCAGC GTGCAGCAGT TCGCTACTGA GCATGGCATT
GAGCTACTTG GCGTCACGCT CGATGGTGTC GCACTGCCAG CCATCGTGCA GAACCGCCAA
AACGACCAGC ACATAAACGT CCCGTTTAGT CCTGCACTCG TGTTAGTTAA TCCTGGCACG
GGGGAAATGA AACCGCTCGC GTATGGCTTT ATCTCTCAAG ACGATTTACT GGGCCGCTTC
CTGAACGTGG CCACCGATTT CGCCCCTGAC TTTTAA
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| Protein sequence | MMTWLNDRLQ HAAVSPFFRW SSRAPLAWLS TKKGDAVVNK RSALVLLMLT TFCLGANATD
AQGWRWYNEP TAPKKQAPKK AETPSVTLTR TQTLTPTEQM DWFHSYYQDT LNDAAINSQD
SKKVERAMLL NQYVSNKSSE FGMTFKKVLL DNPELSYTKD RPTEQAARST YLSLERNKKM
RAVRSLADAG WGLFFVYKGQ EEMDIALAPS VQQFATEHGI ELLGVTLDGV ALPAIVQNRQ
NDQHINVPFS PALVLVNPGT GEMKPLAYGF ISQDDLLGRF LNVATDFAPD F
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