| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4502 |
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| Symbol | |
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| ID | 7090247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011665 |
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| Strand | + |
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| Start bp | 22820 |
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| End bp | 25408 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643463306 |
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| Product | type-IV secretion system protein TraC |
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| Protein accession | YP_002360318 |
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| Protein GI | 217975719 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR02746] type-IV secretion system protein TraC |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAC GTATTAAAAA CGATCTCGGC GCACTGTATG CCAGCAGCAA ACAGCAGCAC
AACCATCTGC ATCATGAATT GCCCTATCGC ATTTATGATG ATGCTGAACA AGTCTTTGAA
AATGCTAATT CGCTTGGTTT TGGCTTTGCC ATTTCGCTGT TTGGCGGGGC GAATGACGAC
TTGATCAAAA CCATGAACGC CTTGGTGTGC ACACTGCCAG AGGGCGACAA ATGGCATTAT
CAATTCGTCA TGGTGGGTAA TAATCAAGTC GGTGAGCTCA TCGAGCAAAA TCAAGCGCTG
CTCAGTGGCC GCAATGCCAT TTGCGATAAA TTTGCCTCAA ATGAAGCTAT CTATGCCAAA
CACAGTTCGA TCAAAGGCTT TGGCACCAAG CTAAGCCACG CATATCACTA CGATTTAAAG
AACACCAAAG GGTTTTTCTT TGTTTCAACC ACCGAGGACA TGCCTGCACT GCTGGATATG
CGCCTTGGCA TTGAGTCAGA GTTGGCGCAA ACAGGCATGC ACATTCGCCG CTTAGCCGCT
GACAGCCTGA TTGAGCATTG CCGCGAACAC TTAAATTTTT CGCATCAACA AGATCGCGTT
TCGCCCGCTA AATATAACGA GTATCAACCT CTCAACACCC AAATTCTCAG CCCTGACAGT
GAGTTCATCA TTAACCGTGA TTCGGTCAAT ATCCGTCACA CACCGATGCA ATCAGACAAC
AGTGTCGATA CCACCTTAAT CAATCTTGGG CTAAAGGGGC TGCCGAACGA CTTTAGGCTG
TATGCGTTTC CCAACTGCAT TGCATCACTC AGTTACACCA TGAACAGTGT TCAATGCCCT
TACCGTGTCA GCGTGTCTTT TTATATTAAT AAAACCGGCG AGCAAACCAC CCGTAACGAC
AGCAAAATTG GTTCTCTGAC CCAAACGGTC GGCTCCCCTA TGCGGTTGTT GATCCCCAGC
GCCGCGGATG AACTGGCTGA ACGCAAGGAG ATACAAAAAG GACTCGGCTT ACACGAGTTC
AAAATCACCA CCATGACATT GAATGTCACC CTGTATACGA CAGAAGCGAA ACAACGCCAT
GACACAGCTA AAGCGATTGC GACCTTCCGT ACAGCAGGCA TGGATTTAAT CCAAAACAAT
AAACTGCAAG GCATGTGCAC CCTGTCCACA CTCCCGTTCT CAATGAGCGA AGGCTTTATG
AAAGACAGCC AAAAAGCGGG CCTGTGTTTC ATGATGAAAA CCTCAAACTT GGTAAACTTT
TTACCGATTG TGGCTGACTA CAAACGCTTA TCCGCAGGGT TACTCTTGCC AACAATGCGC
CATCAAATTA GCTATTTCGA TCCGTTTAAC TGCGGCAGTG ATAACTACAA CATGGCGATT
ACGGGCGGCT CAGGGGCAGG GAAGTCATTC TTCATGCAAG CCTTGGTGAA ATCTATTTTT
GCCAAAGGGG GCAAGGCATG GATTTTAGAC AAAGGCCAAA GCTATAAAAA ACTCACTCAA
ACATTAGGCG GCGTCTATCT CGACAGTTCG CAGATTTTCC TCAACCCGTT TACCCACTTG
GGTAAAGTCC AAAGCGTGCG GGATGCGGGC ACCTTTGGCA TCATTTTAGA CGATGAAGGA
CAAGTCGTTG ACCCGATCGC CGCAGTATTG GGCAACATCA CCGAACTTAT CGCCACCATG
GCCTCACCGG ATGAAAAAAT ATCTGGGTTT CAAAAAGCGA TATTGGGTGA CGCCATTCTA
CTCGCGTGGA AAAAGGCCGG TAACGACACG CTGATTGACG ATGTGCAAAC GGCACTCTAT
GACATTGCCG CACAAAAAAA TGACGATACC CGTATCAGTG ATATCGCTGC GCAATTAAAC
AAGTTCTGCT CACAGGGCAT TCATGGCGCC ATTTTCAATA AGCCCTCGAT GCTCAATCCC
AACATCGACA TCACCACGCT GGAACTCGAT GGATTTAAAG GCGAGCTACA ACGTCCGGTG
ATTTTCGCGT TGATGGTGGC GATTAGCCAA CAAATGTACT TATCGGGCCA ACGTTCTACA
CCCAAAATCT GTGTGATTGA AGAAGCCTGG TCACTCATGA GCGGCGCGAA TGCGCAGAGT
AAGGATTTTA TCGAGGAGGG TTATCGCACA GTGCGTAAGT TCGGCGGCAG CTTTGCCACA
GTAACGCAAG GCATGAAAGA CTTCTTTGCC AACGCAGAGG CCGAAGCCGC CTATAACAGC
TCAGATATTC ATATCACCTT GCGTCAAGGC GAAGGCTTTG GAGACTTCTT GAACAAGCAT
CCTGACCACT TCTCGCCGTT TGAACAATCC ATGATCAAGT CATTCCCCCG CGCCGATGCG
GCGGGCCATT CCTGCATCAT GCTCAAAGCG GGTGGGCTAG TGTCCTTTCA CCGGATTTTT
GCCGATCCAT GGTCGCGCGC CATGCTCTCA ACCGAGCCTA AAGAGTTTGA ATATTGCGAA
AACTTGATTA AGGGCGGCAT GCCGTTACTC GATGCCATTG AACTGACAGC CCAACATTTC
TATCCCGATG ATATGGCCCG CTTTGATGCC ATTTTGTCCG CCGCAGCAAC CCACAAAGAG
GCCGAATAA
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| Protein sequence | MKQRIKNDLG ALYASSKQQH NHLHHELPYR IYDDAEQVFE NANSLGFGFA ISLFGGANDD
LIKTMNALVC TLPEGDKWHY QFVMVGNNQV GELIEQNQAL LSGRNAICDK FASNEAIYAK
HSSIKGFGTK LSHAYHYDLK NTKGFFFVST TEDMPALLDM RLGIESELAQ TGMHIRRLAA
DSLIEHCREH LNFSHQQDRV SPAKYNEYQP LNTQILSPDS EFIINRDSVN IRHTPMQSDN
SVDTTLINLG LKGLPNDFRL YAFPNCIASL SYTMNSVQCP YRVSVSFYIN KTGEQTTRND
SKIGSLTQTV GSPMRLLIPS AADELAERKE IQKGLGLHEF KITTMTLNVT LYTTEAKQRH
DTAKAIATFR TAGMDLIQNN KLQGMCTLST LPFSMSEGFM KDSQKAGLCF MMKTSNLVNF
LPIVADYKRL SAGLLLPTMR HQISYFDPFN CGSDNYNMAI TGGSGAGKSF FMQALVKSIF
AKGGKAWILD KGQSYKKLTQ TLGGVYLDSS QIFLNPFTHL GKVQSVRDAG TFGIILDDEG
QVVDPIAAVL GNITELIATM ASPDEKISGF QKAILGDAIL LAWKKAGNDT LIDDVQTALY
DIAAQKNDDT RISDIAAQLN KFCSQGIHGA IFNKPSMLNP NIDITTLELD GFKGELQRPV
IFALMVAISQ QMYLSGQRST PKICVIEEAW SLMSGANAQS KDFIEEGYRT VRKFGGSFAT
VTQGMKDFFA NAEAEAAYNS SDIHITLRQG EGFGDFLNKH PDHFSPFEQS MIKSFPRADA
AGHSCIMLKA GGLVSFHRIF ADPWSRAMLS TEPKEFEYCE NLIKGGMPLL DAIELTAQHF
YPDDMARFDA ILSAAATHKE AE
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