Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4483 |
Symbol | |
ID | 7090228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011665 |
Strand | + |
Start bp | 2738 |
End bp | 4240 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643463287 |
Product | integrase, catalytic region |
Protein accession | YP_002360299 |
Protein GI | 217975700 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 100 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 0.658405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAGGTC GTAGAATTAC AGATCAACAA ATAAGGCTAT TTATGTCTAA ACGAAAAGAT CATCCTCAAG TTACTGCTGC GGTTAAAGCG GGCATATCTG AACGCTCTGC ACGGCGTATT GAATCCGGCC AGCGACAATT AGGCCCTTCA AAACCTCGAA ACTACCGCAC TCGTACTGAC CCACTAGAGC CTGTATGGGA ACCTGTCGTC CTGCCGCTTC TACAACGGTC TGATACTATT ACTCCTGTTG GGGTGTTTGA CTATCTTATT GAAGAATATT CAGATGCTTT CCCTGCAAAG TTAAGACGAA CCCTAGAGCG ACGTATACAA AAATGGCGAC AGATAAATGG CCGAGACAAG GAGGTTATTT TCCGCCAAGT TAAACAATTG GGTCAGTTAG GAATTATGGA TTTTACTTGG GCTGATTTCA CCGTCACGAT ACAAGGAGTG GCTCTTAAAC ACAGATTATT TAACTATCGA TTACCCGCAA GTGGTTGGAG CTACGCTGAA GTCGTATATG GTGGAGAGAG CTTTGTGGCC GTTGCTACAG GCTTACAAAA TGCCTTCACA CAATCAAATG GCGTTCCACA AGAAGTGAGA ACAGATAGCT TGAGCGCCGC GTATAAAAAC CATTCTAACG AAATATGGTT TACCGAACGA TTTTCTGAAT TATCAATGCA TTATAGCTTC AAACCTTCAA AAAATAACAC CGGCATTGCC CATGAAAATG GGGCGATTGA AAGTGCCAAC AATCATCTGA AAAATCAAAT ACGACAAGCT TTGGCTATTC GTGATTCAAG TGACTTTGAT TGCATAGACG AATATGAAGT ATTCATTGAT GAGGTCGTCC AAAGACGCAA CCGCCGTATT ATGCCACTTC TCATTGAGGA GCAACGACAA TTACAACCTT TGCCTAAATT TGACAGTGCC AATTATGAAG TTCACCCAGT AAAAGTATCA AGCACCAGTA CTTTTCAGTT AAAACGAGTG ACTTATTCAG TCCCATCTAG ACTTGTTGGT GCAACATTAC GCGTACATCT TTTCGATAAG ACATTGGATA TCTATTGCCA GGGCGTGCAC ACATCAACGC TCACCCGCGT GCATACATCG GCAAATCATC GAGGTCATCA AATTGATTAC CGTCACTTAA TCGGTGCGCT GATGAAAAAA CCACGAGCGT TTAGGGGGTG CCAATGGCGA GACCAACTCC TTCCAAATGA AGACTATCGT CAAATATGGA AAGGTATCGA TGCCCAATTA AGTGCTGACG AAGCGAGTCT TTATATGGTT AGGTTACTGA ATATTGCCTG TAAATCAGAG CGAGAAGAGG CGGTAGGAAG ATTTGTCCTT GATGGACTGA ATAACGCTCA ACTGCCAAGC ATATTCGACT GTGAAGACCG TTTTTTAAAA GACGAAGAGT GGGAATACAA CCCTCAAGTA CAGCAACATA GCTTAGCGTC TTATCAGCAG CTCTTCGACG GGGAGAATGG ATATGTCAGT TGA
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Protein sequence | MPGRRITDQQ IRLFMSKRKD HPQVTAAVKA GISERSARRI ESGQRQLGPS KPRNYRTRTD PLEPVWEPVV LPLLQRSDTI TPVGVFDYLI EEYSDAFPAK LRRTLERRIQ KWRQINGRDK EVIFRQVKQL GQLGIMDFTW ADFTVTIQGV ALKHRLFNYR LPASGWSYAE VVYGGESFVA VATGLQNAFT QSNGVPQEVR TDSLSAAYKN HSNEIWFTER FSELSMHYSF KPSKNNTGIA HENGAIESAN NHLKNQIRQA LAIRDSSDFD CIDEYEVFID EVVQRRNRRI MPLLIEEQRQ LQPLPKFDSA NYEVHPVKVS STSTFQLKRV TYSVPSRLVG ATLRVHLFDK TLDIYCQGVH TSTLTRVHTS ANHRGHQIDY RHLIGALMKK PRAFRGCQWR DQLLPNEDYR QIWKGIDAQL SADEASLYMV RLLNIACKSE REEAVGRFVL DGLNNAQLPS IFDCEDRFLK DEEWEYNPQV QQHSLASYQQ LFDGENGYVS
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