Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4398 |
Symbol | |
ID | 7090185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011664 |
Strand | - |
Start bp | 73022 |
End bp | 74377 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643463268 |
Product | integrase family protein |
Protein accession | YP_002360280 |
Protein GI | 217975610 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0364227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00879025 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACAG TGAAATTAAC ACAAGTGTTT ATTCGGTCAT TAGCCCGTCA AACACGCGCC TATATCATTC AAGACAGTCT CTGTCATGGC CTTGGCGTTA AAGTGATGCC CGATAAACCG ATGCAGTACG TTATTAGCCG CCTTATTGAT AATCGGACAC GCACACGCAT TCTTGCGCCT GTTAGTGCGC TAACGGTTAA AGCGGCACGG GAGAAGGCAA CAGGGCAACT TCAAGCATGG CGAGAGGAGC ACACTCAACC GAGCATGAGT GCTTCACCTC GTTTTGACGT GTTTGTTGAA CAAACATGGA AGCCGATGAT TTTTGAACAC TGGAAACCCA GTACAAAACG GTCAGTCTTG CCTGCGCTGA ATAGACGCTT GTTAGCTCAT TTTGGCCGTT ACCCGTTGCA CATGATTAAC CATAAGATGG TGCAAGCATG GTTTGATGAG ATAAGTAAAA CGCGCAAAGG TGCCGCTAAC CGTAACCTTG ATACATTACA ATCCGTCTTC AAGTTAGCAT TGAGGCAGGG GCATTGCCTG ACGAATCCCT GTATTGGTAT TCGGCAAAAC AAAAGGCGGG TATTAAATCG CTTTTTGAGT GTTGCTGAAA TGCAGCGTTT ATCTGTGGCG CTTGATGAAT GTGAAAAGGT CGGCGGCAGT ATTGCTCAAT GTGCTGATAT TTTGCGGCTT TTACTGCTCA CAGGCTGCCG ATTATCGGAA ATCACCTTTT TAAAAGGGGA GTACGTTCGC GGCAATGAAT TGCATTTACC CGACAGTAAA ACGGGGGCAA AAGTGCTTTA CATTGGTCAA GCCGCAGTTG ACATATTAAG TCGCTATCAC TGTAAGGCCA ATACAGAACT TTTTCCGATG AAACAGGGCG CTTCCACTTC ATTGGTACAG TCGCTATGGC TAAGGTTGCG AAAACAGATA GGGATTGAAG ATGTGAGATT GCATGATTTA AGGCATACCT TTGCAAGTTA TGCCGTCATG GACGGATGCA GTATTCCGAT GGTGGCCTCT TTACTGGGGC ATAAAAAAGT CACTATGACG TTACGATATA CCCATGTTGG GGATGATAGC GTAGAGCAAG CCGCTGAGAT TATTGGGGCT GTCTTCAAAG GCATTTTTAC TCAGTCTGAA CCCCTTAAAC CCTTAATACC TCAAACTAAT GAGGCTCCAA CGCTAGCCGT AAAAGTAAAG CAAAAGCGTC TGCCAGAAAG AAAACCAACA GCGAAGCCAA AGCCTAAAGC GGTGAAGAAA GTGAAGCAGG TTAAACCATT ACAGACACCG GCCTCTTTAA CGAAAGAGGA GAGCCGCGCG ATACAACGAT TTAGGGATCG TGAACTATTC TTGTAA
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Protein sequence | MKTVKLTQVF IRSLARQTRA YIIQDSLCHG LGVKVMPDKP MQYVISRLID NRTRTRILAP VSALTVKAAR EKATGQLQAW REEHTQPSMS ASPRFDVFVE QTWKPMIFEH WKPSTKRSVL PALNRRLLAH FGRYPLHMIN HKMVQAWFDE ISKTRKGAAN RNLDTLQSVF KLALRQGHCL TNPCIGIRQN KRRVLNRFLS VAEMQRLSVA LDECEKVGGS IAQCADILRL LLLTGCRLSE ITFLKGEYVR GNELHLPDSK TGAKVLYIGQ AAVDILSRYH CKANTELFPM KQGASTSLVQ SLWLRLRKQI GIEDVRLHDL RHTFASYAVM DGCSIPMVAS LLGHKKVTMT LRYTHVGDDS VEQAAEIIGA VFKGIFTQSE PLKPLIPQTN EAPTLAVKVK QKRLPERKPT AKPKPKAVKK VKQVKPLQTP ASLTKEESRA IQRFRDRELF L
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