| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4392 |
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| Symbol | |
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| ID | 7090179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011664 |
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| Strand | + |
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| Start bp | 59658 |
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| End bp | 65618 |
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| Gene Length | 5961 bp |
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| Protein Length | 1986 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643463263 |
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| Product | conjugative transfer relaxase protein TraI |
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| Protein accession | YP_002360275 |
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| Protein GI | 217975605 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family
[TIGR02760] conjugative transfer relaxase protein TraI |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCA TCAGTCCCAT TGCGTCGAGC GCTGGCGGCG CGGCCAGCTA CTACCTCAGT
GAAGAAAAGA ACCTCAATTT GCCTGACGTG TCGTTAGAAA AAGCAGCGGA CGCCAAAGAA
GGGGAAACCA ACTATTACTT GAAAGAGCAG AGCGCCGAGC CCAATACCCA ATGGTTTGGC
AAACTGGCAG AGCAAGAGGG AATGTTAGGT AAGCCCGTTG AAGAACATCA ACTCAAAGAG
GTGTTAGCCG GTAGCCTGAA CGACCAAACG CTTAAAACCC AAAACAGCAA CGCCCGCAAC
GGTTTTGACT TTACCTTTTC GGCGCCTAAA TCCGTCAGTT TACTTGCACT CGTGGGCGGC
GATAAACGCT TAATGACAGC GCACGATGAC GCGGTAAAAT TCGCGTTATC GCATATCGAG
AAAGATGCGG CGCAGGCCAG ACAAACCAAC CCTGATACCA AAGCGACCTC TTTTGAAAAC
ACGGGCAATT TGCTGTTTGC AATGGTGCGT CACAAAACCA GCCGTGAAGA AGATCCGCAG
CTGCACACCC ACTCACTCAC CGCCAACATG ACCAAGGACA GCGAGGGCAC ATTGCGCGCG
CTGGCAAGCA GCTTTAAACA AAAAGGCGGC ATCATCAATG GCACGGGTGA GCGGGTTTAT
AACCATCAAA AATACTATAC CTCGCTCTAT CAAAGCGCCT TAGCCCGCAG TGTTGAACAA
GCGGGTTATC AAACTCGTTC ACTGGGTAAT AATTTGTTTG AAGTCGAAGG TGTCCCGCAG
TCCTTACTCG ATACCTTTTC AACCCGTAGC CAGCAAATCA ACGAACAAAC CCAAAGCTTA
GGTTTAGACT CCCAAGCGGC GCGGGATGTG GCCGCAAAGG ACACCCGCAA GAGTAAAGCC
TATACCAGCG AAGCCACCTT GTTTGAGCAA TGGAAAAACA AAGCCAATAA CAGCGGCTTT
AACCTGACAA GCTTCGTGAC GGACAGCATG TCACGAGAAA CATCACTCAA TGCGTTAGCG
CTCAAACCCG CCGCTATCGA TGCGGTGAGT CGCGCGATTG AGCACGCCAG TAACACCCAA
AACCGTTTTA ATTACGCGAA ATTAGTGGAA TCAGCCACGC TTGAATTTAC ACTAGGCCAG
AAGCTCGATG CGCTCGATAT TAAATTGGCA CTCGATAAGC ACATTGAAGA TGGCGCACTC
ATTCCGCTTG ATAAAGAGTC TGCGACCTTT ACCAGCGCCG CCCACATCAA AGCCGAAACT
AACCTGCTAG AGAGCATCAA GCCAAAAACG GCCAACATGC GCCAAGTGGT CGATACCAAC
ACGCTTCAAG GCAAAGGCTT AAATGCGGAC AACCAAAAGA AAGTCTCTGA ACTGTTCGCC
AGTACCAAAC AAGTTAACCT AGTGAACGTC TTTGGTAGCA GTGAACAGCT CGCGACCGCC
CTGCTCAATG TCGGTGAGGC CAACGGTAAA CGTATTCACA TCATTACCCC TGACATGAAA
AGCAAACTGC ACACCAGTGA ACGAGTGCAA CGCGATTCAT CGACTATTGG CAAGTGGATA
ATGAACCACT TCAAACCTGA CCACACACAC ACACTCAGCA GCTTTACTAA AACGGCCAAC
AACACTAACC GCGATATTTT AGTGGTTGAG AACGCCAATA AACTCGGCCT TAACGACTTT
AATGCCCTGC TCGCGCAAGC CAAAGCGGGT AACAGTAAAG TGATTTTGCT CAATCACGTC
AATGCCAAGC AAGGCATGAA AGCCGGTAAC GCTATCGAGG TACTTAAAAA AGGTAACGTA
AACGAAAGCA ACTGGGTCGC CACCAAACAA AGCAACACAG CCATGCGACT GCATGAAAGC
AAAGACAGTG ACAGGGTTAA CCTGATTGCA AAAACTTACG CGCAACTGTC CGAGAAGCAA
CACACCCAAG TCATTGCGGG CACCCATAAA GACGTGAAGC AGCTTAACAG CGCGATCCGC
GCAGAACTGC AAAATCAAGG TGATGTATCG CGCCTTGGGC TCAACATCCC TACCCTTAAT
CCCGTGTTCT TATCCGCGCA GCAACGGGAA GTCGTCGGCC AGTACACCAA GGGCATGGTA
CTCACCCAAT GGCAAAAAGT CGGCGGCCGC AATCAACAGC AGCAATTGAC GGTGGACAGC
GTTAACCGTG ATAACAACAC TCTCACGCTG ATAGACAAAA ACGGTAAAGC CTCCGAGATT
AACCCCAGCA GCAAAGCCTT TAAAGCCGCA GAGTACGCGA TCGCTAAACC GGACAATTTA
CATATCGCCA ACGGCGACAA ACTCATCATG GCCACAAACC ATCAAGACAG TGGTTTGAGC
AAACAAATTT ATACGATCAA CGCCCTGTCC AAAGAATGGG TCACGCTCAA AGACGAAAGC
GGCAAACAGC ACAGCGTTAA AGCCAGTGCA TTGCACCATG CGCCGCTCAA TCATGGTTAC
GCCACCACGC CAAGCAATGC CAGCCCTAAT GCAAGTCACC ACATCGTCAA TATTAAAGCC
TATAGCGCCT CAAAAGAGTG GTTACATGAC ACGCTGACAC AAGGCATCAA ACACATTGAT
ATATTCACCG ACAAGGCACA ACAATTTGAT GACCGATTAG AAAAAAGTGA GGTGAAACCA
TCCAGTATTT CGCGCATCAT GCAAGCCGCT GATATGCCAG AAAAGTTCGT GAATCGCCAA
ACCACGGCCC TGCTCACCCA AGATGTGACC GCAGCACTGA ATGCCATTGG TGCCCAGCAT
CAAGACAAAG GGCTTATTCA CAATGCCGTA GATTTTGCCA TCCAGCACAT TAGCGAGAAA
GAAGCCGGTT ACTCACAAAA AGAGCTGATT GTTAATGCGA TCAAGTACGC CTTTGAGGAA
AAAGGCACCA GCATTACCCA ACATGAAATC ATCAACACCC TGCAACACAT GGCCACGAAC
AGCACGGATA AAGGCGCGCC CTCACTCCTG AGCGCCGAAT ATCACGACGG CACCCGCTGG
ACCACCCAAG CCGCCATCGA TACCGAAGTA CGTATTTTAG ACAGACTACA AGCGGGCAAA
GATCAACTTG CGCCCCTTAC CAGCGTTGAA CACGCCGCGC AGGTACTCAG TCAAAATCAA
AACCTGACCG ATGGCCAAAA AGACGCGACC TTGCTTATCA CCACCACCAA AGACCGATTT
GTGGGTGTTC AAGGGTTAGC GGGTACGGGT AAATCGACCA TGCTTGAAAC GGGTATCGAT
CTTGTTAAAC AAAGCGAATC CATTCTCAAC ACACAACCCA ATAAGACACC GACACAATTC
ATCGGTCTAG CGCCGACACA CGCCGCCGTT AACGAACTCA AAGACAAGAA CGTCGAAAGC
CAAACGGTGC AATCACTCCT AAGCAACTTT TTAAGCCAAG ATGCGAAACC TGACCAATAC
GCCAACACCG TGTTCTTGCT CGATGAATCC TCGATGACCA GTAACGCCCA AATGGATAAA
TTTACCCATT TGATTGAGAC AACAGGCGCG CGCGCCGTGT TCTTGGGTGA CACTAAACAG
TTAACGTCCC AAGAAGCGGG TAAACCTTTT GAACTCGCGT TAAACAAAGG CGCAATCAAT
AGCGTCACCA TGAAAGACAT TGTGCGCCAA CAGAACAGCA CGCTACTGAG TGCAGTACAC
AATATTGTCG ATCGCCAAGG CGAAAGCGCT ATTGATAAAA TTCAGCAACA ATTACCCTTT
GACCAATACA CCGCGCCCAC CGCGAACGAC GCGGTAACGC CCGAAAAGCA GGCTACCGCT
AACATCAATC AAAGCTTGAA TATCATTTCA ACTTTGCAGC CGCTAACTGA TAACCCAAAG
AAAAACCAGC AACTTGCGAC CGAAGCCCTG CCCGCCACTG TGGCACTGGA ATACTTGGCC
AGAACACCTA AAGCGCGTGA AAATACCCTT ATCATTGCGT ACACCAACAA AGAACGCGAC
GACATTACCC ACGAAATTCG CCAAGGGTTA CAGCAACAAA AAAGCCTCAG TACCGAGCAA
TTCACCGTGC CGCGATTACG CGGAGTTCAT GCCAGTAAGG CGGAACTGGC GACCATGTTG
CCCTATCAGC AGGGGTTAAT CCTGACGACC GGTAAAGACA GTTATTTTGA AATTATGAAG
GTTGATAAGC TCAATAACAT GCTCACCCTC GCGGATATGA AAACCGGCGA GGAAAAGCAT
TTCTTCCCCA AAAATCATGG TCACAAATTC ACGAACCTTT GGGCTAAGAG TGAGCAACCT
CTCGCAGAAG GCGACAGTAT CATGCTCCGC AAAAACGATA TTGACCGTGA AATGCAGGGC
AACAAAACCT ATACCGTTAG CAGCATTGAC GATAAACAAA TGCAGCTCAA ATCCACGGAT
AACCACACAT TAACGCTCTC AACCAAAGAT TTGAAAGATG CTCATTGGGA TTACGCATAC
ACCCGCACCG CCGATATGGC GCAAGGGGCA ACCTATGAGA ATGTCATTAC CGCGATTAAG
GGCCAAGGTG CATTAACTAA CGTAAGGCGC GCGTATATCG ATATCACCCG TGCCAGTAAG
CACGTAAAAA TCATCACCGA TAACCCGCAA AAAATGATGC TCTCATGGGT CAATAACGAT
CCCAATAAAG TCTCTGCACT TGAGACAAGA GATAAGTATT ACCCTGAACA TACCCCGCTA
TTTAATGACA AACCCTTGCC GCAGGAAAAC CCAAAGTACC TCGATGTAAA TGGATATGTG
GATCTAAAAC TGATGGCCAC CGAGCTAAAT GCCAAGCTTC CGGCCTACAG TGAATCACTG
GCAACGCAGC TTTTAGGTGA GCCGAACCAC GATAAATCAG ACAAAGATAA CCTGACATTT
GGCAAAGAGG GGAGCCTAAC ATTGACCACA ACGGGCCAAT ATCGTGGCTA TTTTAAAGAC
TGGAAAACCG GCGATAAAGG CACCTTAATT AACCTGATTA TGGTCGCTGA AAAATGCAGT
TATAAAGATG CACTTTATAA AGCCGATAAA ATGATGAACG AACCCGATAA ATATAATCTG
GTAAAAAACC CACAGCATGA TGAATTAACA CATGCCATTC CGGTTAAGCA AAGCCAATTA
GAAGCGCGCG CGAAGCAATA CTTTAACGAA GCTAAACCTA TAGAAAACTC ACTCGCACAA
ACCTATTTAG CCAAGCAAGG AATCGAGGTT ACGAAGCATG AAAACTTACG GTTTCACGAT
GCCGTTTATT CGTCAGAAAA ACGTGGAACC TTCCCCGCAT TAATCGCGAA TATCACCAAT
GACAAGAGTG AAACCAAGGC AGTAGAAATC ACTTACCTTG ATAAATCCAG CGGTGACATT
GCAGCGCTAA AAATAAATAA GCGCATACTC GGCTCTAAAT CGGGGAACAG CACGACGATC
AACAAAGGCA ATAATTCAGA CTATAGTATT GTCGCTGTCG GTGTAGAGAA TGCGCTTAAG
ATAAATGCTG ACAATAAAAA CGGGGCTGAC GTTATTGCGC TAAACAATAA TAATGACACT
AAAACATTTA ATACAAATGA ATTGCGCGAA AACGTGATAG TGGTACTTGA TACTAATAAT
TCACAAGACA CTGCAAAACT GGCTAATGAC CTTACGGAAA AATTCAGTAA GGAAAATATA
CATGCGGTTA TTATTGAACC CAGTCTGATA CCTGACGGCT TAAACAAAGT CGAAACGACA
AAGCAATTAG TCAATGAAGC GGTCTATAGC ATAACGACAA AAGACAATAC CCTATCTAAA
GCCATTCAAT CATTGAGTCA TGATATTGCA GACACCAACA ATATAACGAT TAAAGATGAC
AGCACTAACG TAGCAACGAA TAAAATAAAG CACGATGAAC ACTATCAAAA TTTAGCAATG
GATAGCCACC GTTCAACGAC GAAAGAATAC TCCCCCAACA TCGACAATCC TAAATTGGAT
ATTGGGGAAA AGACCATGTA A
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| Protein sequence | MLSISPIASS AGGAASYYLS EEKNLNLPDV SLEKAADAKE GETNYYLKEQ SAEPNTQWFG
KLAEQEGMLG KPVEEHQLKE VLAGSLNDQT LKTQNSNARN GFDFTFSAPK SVSLLALVGG
DKRLMTAHDD AVKFALSHIE KDAAQARQTN PDTKATSFEN TGNLLFAMVR HKTSREEDPQ
LHTHSLTANM TKDSEGTLRA LASSFKQKGG IINGTGERVY NHQKYYTSLY QSALARSVEQ
AGYQTRSLGN NLFEVEGVPQ SLLDTFSTRS QQINEQTQSL GLDSQAARDV AAKDTRKSKA
YTSEATLFEQ WKNKANNSGF NLTSFVTDSM SRETSLNALA LKPAAIDAVS RAIEHASNTQ
NRFNYAKLVE SATLEFTLGQ KLDALDIKLA LDKHIEDGAL IPLDKESATF TSAAHIKAET
NLLESIKPKT ANMRQVVDTN TLQGKGLNAD NQKKVSELFA STKQVNLVNV FGSSEQLATA
LLNVGEANGK RIHIITPDMK SKLHTSERVQ RDSSTIGKWI MNHFKPDHTH TLSSFTKTAN
NTNRDILVVE NANKLGLNDF NALLAQAKAG NSKVILLNHV NAKQGMKAGN AIEVLKKGNV
NESNWVATKQ SNTAMRLHES KDSDRVNLIA KTYAQLSEKQ HTQVIAGTHK DVKQLNSAIR
AELQNQGDVS RLGLNIPTLN PVFLSAQQRE VVGQYTKGMV LTQWQKVGGR NQQQQLTVDS
VNRDNNTLTL IDKNGKASEI NPSSKAFKAA EYAIAKPDNL HIANGDKLIM ATNHQDSGLS
KQIYTINALS KEWVTLKDES GKQHSVKASA LHHAPLNHGY ATTPSNASPN ASHHIVNIKA
YSASKEWLHD TLTQGIKHID IFTDKAQQFD DRLEKSEVKP SSISRIMQAA DMPEKFVNRQ
TTALLTQDVT AALNAIGAQH QDKGLIHNAV DFAIQHISEK EAGYSQKELI VNAIKYAFEE
KGTSITQHEI INTLQHMATN STDKGAPSLL SAEYHDGTRW TTQAAIDTEV RILDRLQAGK
DQLAPLTSVE HAAQVLSQNQ NLTDGQKDAT LLITTTKDRF VGVQGLAGTG KSTMLETGID
LVKQSESILN TQPNKTPTQF IGLAPTHAAV NELKDKNVES QTVQSLLSNF LSQDAKPDQY
ANTVFLLDES SMTSNAQMDK FTHLIETTGA RAVFLGDTKQ LTSQEAGKPF ELALNKGAIN
SVTMKDIVRQ QNSTLLSAVH NIVDRQGESA IDKIQQQLPF DQYTAPTAND AVTPEKQATA
NINQSLNIIS TLQPLTDNPK KNQQLATEAL PATVALEYLA RTPKARENTL IIAYTNKERD
DITHEIRQGL QQQKSLSTEQ FTVPRLRGVH ASKAELATML PYQQGLILTT GKDSYFEIMK
VDKLNNMLTL ADMKTGEEKH FFPKNHGHKF TNLWAKSEQP LAEGDSIMLR KNDIDREMQG
NKTYTVSSID DKQMQLKSTD NHTLTLSTKD LKDAHWDYAY TRTADMAQGA TYENVITAIK
GQGALTNVRR AYIDITRASK HVKIITDNPQ KMMLSWVNND PNKVSALETR DKYYPEHTPL
FNDKPLPQEN PKYLDVNGYV DLKLMATELN AKLPAYSESL ATQLLGEPNH DKSDKDNLTF
GKEGSLTLTT TGQYRGYFKD WKTGDKGTLI NLIMVAEKCS YKDALYKADK MMNEPDKYNL
VKNPQHDELT HAIPVKQSQL EARAKQYFNE AKPIENSLAQ TYLAKQGIEV TKHENLRFHD
AVYSSEKRGT FPALIANITN DKSETKAVEI TYLDKSSGDI AALKINKRIL GSKSGNSTTI
NKGNNSDYSI VAVGVENALK INADNKNGAD VIALNNNNDT KTFNTNELRE NVIVVLDTNN
SQDTAKLAND LTEKFSKENI HAVIIEPSLI PDGLNKVETT KQLVNEAVYS ITTKDNTLSK
AIQSLSHDIA DTNNITIKDD STNVATNKIK HDEHYQNLAM DSHRSTTKEY SPNIDNPKLD
IGEKTM
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