| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4299 |
|---|
| Symbol | |
|---|
| ID | 7089101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 5109126 |
|---|
| End bp | 5110109 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643463173 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_002360188 |
|---|
| Protein GI | 217975437 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000200396 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG CCAAAGCGAC ATTTTCGACT GAACACGATT TAAATACCTC AGAGCAGCAA
GCCTTCTGGC AAAGCGTTGT TCAAGACACG CTGATCACAG CTGATGGCAT CACGCTGGCT
TATATGATGG TCAAACATCC CCAAGCGCAT ACCGCAATCG TTCTCAGTAG TGGCCGAGTT
GAATCCTATT TAAAGTATCA AGAATTGGTC TTCGACTTGT ACCAACAGGG TTACTCTGTT
TATGCCATCG ATCACCGTGG CCAAGGATTG TCGGATCGTA TGACAATTAA TCCGCACATG
GGTCATGTGC GAAGATTTAA TGATTATATT GATGATTTTG CACTGTTTAT GCAGAAGAAA
GTGTTACCGC AAAACGATAA ACAGCTCATG CTACTTGGCC ATTCAATGGG TGGCGCGATT
GGCACTTTGT ATCTCAAACA GCATCCCGAT ATTTTTACCG CCGCGGCATT TTCAGCGCCC
ATGTATGGCA TCAAATTACC TATGCCAAAA GCATTCGTGC GCTGGTTAGC AAGTAAGCTC
GATACCACTC TCAATGGCGG CGAACCTAAC TATGTGCTTG GAGGACAGAA CTATAAACCG
GTTCCCTTCA AAGGAAATGA GCTAACCCAT TGCCAAAGTA GATACCAAGC CTATCGAGAC
TTGTATGACG CGGCCCCTAA GTTACAACTC GGTTCCCCAA CTAACCGTTG GTTGACAGAA
TCTTTAGATG CAGCAGACAC TTGCGTACTG GCAACAGCGC AAATTCGCAC GCCGATCCTG
ATACTGCAAG CGAGTGAAGA TAAGATTGTT GATAATGCAG CCCAGAATCT TGCGGTGAGC
ACTCATTGTC AATTGAAGGT GATAGCGGGG GCTGCCCATG AGATTTTTAT GGAAAAAGAT
GCCTATCGAA ACCAAGCCTT AAATTATGCC CTCGACTTCT TTAAACGCTT CGCAATAAAG
GACGAGGACA AACAAGCTGG ATAA
|
|---|
| Protein sequence | MSQAKATFST EHDLNTSEQQ AFWQSVVQDT LITADGITLA YMMVKHPQAH TAIVLSSGRV
ESYLKYQELV FDLYQQGYSV YAIDHRGQGL SDRMTINPHM GHVRRFNDYI DDFALFMQKK
VLPQNDKQLM LLGHSMGGAI GTLYLKQHPD IFTAAAFSAP MYGIKLPMPK AFVRWLASKL
DTTLNGGEPN YVLGGQNYKP VPFKGNELTH CQSRYQAYRD LYDAAPKLQL GSPTNRWLTE
SLDAADTCVL ATAQIRTPIL ILQASEDKIV DNAAQNLAVS THCQLKVIAG AAHEIFMEKD
AYRNQALNYA LDFFKRFAIK DEDKQAG
|
|---|
| |