| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4285 |
|---|
| Symbol | |
|---|
| ID | 7089087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 5091513 |
|---|
| End bp | 5092706 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643463159 |
|---|
| Product | 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| Protein accession | YP_002360174 |
|---|
| Protein GI | 217975423 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.560532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000435103 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCCTCTA CCTCATTCTA CGCACAGATT AATCAACAGC TTGCAGACAT CAAAGCCGAA
GGCTTATATA AAAGCGAGCG TGTTATTGCC TCACCGCAAC AGACTGCCAT TCAAGTTAAT
CAGCAAGAAG TTATTAACTT TTGCGCGAAT AATTACTTAG GCTTGGCGAA TCACCCAGAG
CTAATCAAAG CCGCCCAACA GGGCTTAGAC AGCCACGGCT TTGGTATGGC GTCGGTACGT
TTTATTTGCG GCACCCAAGA TATCCATAAA AAGCTAGAAG CTAGCCTAAG CGAATTTCTC
GGCACCGAAG ACACCATTCT TTACTCTTCA TGTTTTGATG CCAACGCCGG CCTGTTCGAA
ACCTTGCTAG ATGCAGAAGA CGCGATTATT TCCGATGCGT TAAACCATGC TTCTATCATC
GACGGTGTAC GTTTATGTAA AGCCAAACGT TTCCGTTATG CCAACAACGA CATGGCCGAT
TTAGAAACTC AGCTGATCGC CGCTAAAGAA GCTGGCGCCC GTAACATCTT GATCGCCACC
GACGGCGTAT TCTCCATGGA CGGCGTGATT GCAAACCTTA AAGGTGTATG TGATTTAGCC
GATAAATACG GCGCACTGGT GATGGTCGAT GACTCTCACG CGGTAGGCTT TATTGGCGCG
AACGGCCGTG GCACCCACGA ATATTGCAAT GTGATGGACA GAGTCGACAT CATCACAGGC
ACCTTAGGTA AAGCCTTAGG CGGCGCATCG GGCGGTTTCA CTTCGGGTAA AAAAGAAGTC
ATCGACTGGT TACGCCAGCG TTCACGTCCT TACCTGTTCT CTAACTCATT AGCGCCGTCA
ATCGTGACTG CATCTATCCA TGTGTTAGAA ATGCTCAAGT CGGGCCAAGC ACTACGCGAA
GCCGTATGGG AAAACAGCCG TTATTTCCGT GAGCAAATGT CAGCAGCAGG CTTTACTTTG
GGCGGCGCCG ACCACGCGAT TATCCCTGTG ATGATTGGCG ATGCGAAACT GGCGGGCGAC
TTTGCTAACC GCTTATTAGC AGAACATATT TATGTTATTG GCTTCTCATT CCCTGTGGTT
CCTAAGGGAC AAGCCCGTAT CCGTACGCAA ATGTCAGCGG CACATACCCG TGAGCAACTC
GACAAAGCGA TCTCCGCCTT TACCCGTATT GCCAAAGAAA TGGGCATTAT TTAG
|
|---|
| Protein sequence | MASTSFYAQI NQQLADIKAE GLYKSERVIA SPQQTAIQVN QQEVINFCAN NYLGLANHPE
LIKAAQQGLD SHGFGMASVR FICGTQDIHK KLEASLSEFL GTEDTILYSS CFDANAGLFE
TLLDAEDAII SDALNHASII DGVRLCKAKR FRYANNDMAD LETQLIAAKE AGARNILIAT
DGVFSMDGVI ANLKGVCDLA DKYGALVMVD DSHAVGFIGA NGRGTHEYCN VMDRVDIITG
TLGKALGGAS GGFTSGKKEV IDWLRQRSRP YLFSNSLAPS IVTASIHVLE MLKSGQALRE
AVWENSRYFR EQMSAAGFTL GGADHAIIPV MIGDAKLAGD FANRLLAEHI YVIGFSFPVV
PKGQARIRTQ MSAAHTREQL DKAISAFTRI AKEMGII
|
|---|
| |