Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4281 |
Symbol | |
ID | 7089083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 5087245 |
End bp | 5088288 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643463155 |
Product | glycosyl transferase family 9 |
Protein accession | YP_002360170 |
Protein GI | 217975419 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000734262 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTTTAA ATCCCAATAC CATGAATTCC CTTTGTTTGC TTCGCTTATC CGCAATCGGT GACGTCTGTC ATGCCGTGGC TATGGTGCAG GCGATTCAGC GGCAATACCC CGAGCTCAAA ATCACATGGG TGATCGGTAA ACTCGAATAT CAATTGTTGA AGCATCTACC CTGCATTGAG TTTGTTATTT TTGATAAATC TCAAGGATGG CGTAGCTATT TTAATTTACG TAAGGCATTA AAAGGCCGAC GTTTTGATGT GCTGCTGCAT ATGCAGGTTG CGCTACGTGC AACTTTGGCT TCATTAGCCA TCTCGGCAAA AGTGCGCATA GGTTTTGATC GTGCCCGCGC CAAAGAAGGT CAGTGGCTAG TGACGAATCG TAGGGTTGAG CCCTTGGCCA AGCCCCATGT GCTCGAAGGA TTTATGGGAT TCGCTAAGGC GATTGGCGTC AAGGATCTCA CTCCTCAATG GCATATCCCT GTACCAATTG CGGATACTGA ATTTGCCCAG ACGCAGATTA AGGACAATGA AAAAGTCTTT ATCATCTGCG CCGCAGCCAG TAAGGCTGAA CGTAACTGGT TGCCCGAGCG TTATGCCGCC GTCGCGAGCC ATGCGATTGC GAAAGGATTT AGAGTCATGC TGTGCGGTGG CCCAACTCAA CTTGAGAAGG ATTTAGCAGA GCAAATTTTG CAGGCGTGCC CTTCTAAAAT CGATAATTTA GTGGGCAAAA CCAGTCTGGC TCAACTATTA GCCCTGCTAA AACGCGCTAG TTTAGTGTTA GCGCCTGATA CGGGCCCTGC GCATATGGCG GTGACCCAAG ACACGCCAGT CATTGGTTTA TATGCCCATT CAAATCCTGG GCGCACAGGT CCTTATCTAT CGCAGCAATA TGTGGTGAGC GCCTATGATG AGGCGATAGC ATCCCAACAT AGAGGTGAAG TTAAGTGGGG TACTCGCGCC AAAGGCGAGC ATTTGATGGC GTTGATCAGT GTTGAAGCCG TGATTGAGAA GTTTGAGTTA GTGGTTCAGC AGACACTCAG TTAA
|
Protein sequence | MSLNPNTMNS LCLLRLSAIG DVCHAVAMVQ AIQRQYPELK ITWVIGKLEY QLLKHLPCIE FVIFDKSQGW RSYFNLRKAL KGRRFDVLLH MQVALRATLA SLAISAKVRI GFDRARAKEG QWLVTNRRVE PLAKPHVLEG FMGFAKAIGV KDLTPQWHIP VPIADTEFAQ TQIKDNEKVF IICAAASKAE RNWLPERYAA VASHAIAKGF RVMLCGGPTQ LEKDLAEQIL QACPSKIDNL VGKTSLAQLL ALLKRASLVL APDTGPAHMA VTQDTPVIGL YAHSNPGRTG PYLSQQYVVS AYDEAIASQH RGEVKWGTRA KGEHLMALIS VEAVIEKFEL VVQQTLS
|
| |