Gene Sbal223_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4260 
Symbol 
ID7089201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp5063401 
End bp5065554 
Gene Length2154 bp 
Protein Length717 aa 
Translation table11 
GC content49% 
IMG OID643463134 
Producthistidine kinase 
Protein accessionYP_002360149 
Protein GI217975398 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000203667 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCATTCT TCACTCACTT TTTTGGTGTC AGTTGGCAGC AAATGCAGGC CAAGGTTCGC 
TATCGCATAT TAATCCTGAC ATTACTGCCT ATTCTGCTGA CACTGGTGAG TTTAGTGTTT
ATCACTATTT ACTGGAATAT CAGCTACACA GGTAAGCAGC TGTTTATGAA GGTTAAAGCT
GACTTATCTG TTGCCGAAAA TACCTTGCAG CAAGTGCAAG TACGCCAAGA AAAACAACTC
GAACGTGTGG TAACGTCTTG GACCTTTCAA AATGATTTTA GGCCACTTTT CAGTGGTAAA
GAATTAACTG GTGAAGTCAT CCACAGAGCC AGTCTCGACG CATTTCTCCT GGAACAGAAA
AAACAACTTA ACCTCGATTA TCTGCGTCTC GTCACTGTCG CCGAAGCGGC CGCTGACCCT
GATTTACGGC AGATCCTCCC AAAGATAAAC GGTTTATTAC CTTATTCCGG CTTGATGGTG
TTGCCGCCCG AACGCTTATC TCGCATCGAC CCAGAATTAG CGGTCACTGC GAGCATCCCG
ATAGTCGCGA CTTTGCGGGC GCAGAGCCCG ACAAAAACCG TTGAAGAACG CGGTTTATTG
AGCCGTAGTC TACTGCCCGT GCCTGATATG CAAGGTAAAG TGGCTTGGTA TCTGGATGGC
GGCATCCTGT TCAATCGTGA CATTCGGATT GTCGACCACA TTCGTGATCT GGTGTACGAC
AAGGGCACTT TGCCCGAGCG CTCCATCGGC ACAGTGACCA TCTTCTTAGA TAACATCCGT
ATTTCCACTA ACGTGCCACT GCACTTTTAT CCCACGGGCA ACGAGATGCA AGGTCGCGCG
CTGGGCAGTT TAGTGTCGGA GGAAGTTAAG GAAAAAGTGT TAACCCAAGG CGAGCAATGG
GTCGACCGCG CTTTTGTGTT TAACGATTGG TTTATATCCG CTTATGCTCC CTTGGAAGAT
ATTCGCGGCC AGCGTGTCGG CATGATCTAT ACGGGGTTTT CTGAGTCACC TTTTATCCAT
AATTATTTAT TAAATATCAT AGAGCTGGGC ACGATTCTAA TGTTGGTGCT GCTGGTGTCT
GGCTTGCTGG TTTATCGCGG CGCCTATAGC TTGTTGCAGC CGATTGAGCG TATCCACCAC
GTGGTGCAAG CGGTGCAGTC AGGGCGCAAT ATTCGTATTG GCGCTTTAGG GTTAGATAGG
GATAACGAGT TATCGAACTT GGCCGAGCAG TTCGACAGTA TGCTCGATCT GCTGCAGCGC
CGAAATGCCC AGATCCAAGC GGCGGCAGAG CAGCTAGAAA TGAAGGTCGA AGAGCGTACC
CGCAGCTTGC AGGACAAAAC CTTAGAGTTG CAACGTAACG TGGCGTTACT GAATGAAACA
CGTCAACAGC TCGTCACCAA CGAGAAGCTC ACCGCACTCG GTGAATTGAC CGCGGGTATT
GCCCATGAAA TCAATAATCC GACCGCCGTT ATCCTCGGCA ACATGGAGTT ACTGCGCTAC
GAGCTTGGCG ATAATGCGGA AGTAGTAAAA GAAGAAATTG ATCTCGTGAT TCAACAGGTG
GGACGGATCA GCACTATTAT CCGCAGCCTG TTGCAGTACA GTCGTCCGGG CGAATTTAAC
GCCCCGTTAG AAATGCATCC GATTACCCCC ATTATTGAAG AGATGCTGGT GTTAGTGCGG
CATTCGATTC AGAAACAAGA AGTAGTTTTG ATCACTGAGT TAAACGCCAG TTGTCCAGTG
CAGGTCAATC GACCGCAGTT GCTGCAAGTC TTGATTAATC TGGTAGTAAA CGCGGCGCAT
GCGATGGACG GTAAAGGACG TATCTGGGTG CGAACCTATG ACTGGGTGCA GCAAGATATG
CCGATTGGCG TTAAAATCGA AGTGGAAGAT GAAGGCTCTG GGATAGCACC AGAGCAGCTA
GGGCGGATTT TCGACCCCTT TTACACCACG CGTAAGGATG GCACTGGTTT AGGGCTTTCG
CTCAGTTACG GCATTATTAA GCGGATTGGT GGCACGATAG AAGTGAGTTC AACCTTAGGT
AAAGGCACGT TATTTACCAT AGGCTTGTAC CATGAGGCGA AGGAAGATCA GCAAAACAAT
CCCTACGAGG GCTTACATAT TGCGGGCAAC TACAGCGACA TGTCTGCCGA TTAG
 
Protein sequence
MSFFTHFFGV SWQQMQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA 
DLSVAENTLQ QVQVRQEKQL ERVVTSWTFQ NDFRPLFSGK ELTGEVIHRA SLDAFLLEQK
KQLNLDYLRL VTVAEAAADP DLRQILPKIN GLLPYSGLMV LPPERLSRID PELAVTASIP
IVATLRAQSP TKTVEERGLL SRSLLPVPDM QGKVAWYLDG GILFNRDIRI VDHIRDLVYD
KGTLPERSIG TVTIFLDNIR ISTNVPLHFY PTGNEMQGRA LGSLVSEEVK EKVLTQGEQW
VDRAFVFNDW FISAYAPLED IRGQRVGMIY TGFSESPFIH NYLLNIIELG TILMLVLLVS
GLLVYRGAYS LLQPIERIHH VVQAVQSGRN IRIGALGLDR DNELSNLAEQ FDSMLDLLQR
RNAQIQAAAE QLEMKVEERT RSLQDKTLEL QRNVALLNET RQQLVTNEKL TALGELTAGI
AHEINNPTAV ILGNMELLRY ELGDNAEVVK EEIDLVIQQV GRISTIIRSL LQYSRPGEFN
APLEMHPITP IIEEMLVLVR HSIQKQEVVL ITELNASCPV QVNRPQLLQV LINLVVNAAH
AMDGKGRIWV RTYDWVQQDM PIGVKIEVED EGSGIAPEQL GRIFDPFYTT RKDGTGLGLS
LSYGIIKRIG GTIEVSSTLG KGTLFTIGLY HEAKEDQQNN PYEGLHIAGN YSDMSAD