Gene Sbal223_4257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4257 
Symbol 
ID7089198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp5060877 
End bp5061617 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content45% 
IMG OID643463131 
Producthypothetical protein 
Protein accessionYP_002360146 
Protein GI217975395 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.216759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGAT TCTTTGCTAT TTTTTGCTTA CTTTTAGCCG TGTTACCTGT ATCCATTTGC 
GCCGCCCAGC CGATTGTCGT CAATGTAGCG ACGGCATCGT GGGATGATTT TGCCAATCGT
GATGAAACGG GCTATTACTT CGAGTTACTT CAGCGGGTTT TCCCTGAGCC AGAATGGCAA
CTCAAGGTGC AGTTTATGCC CTTTGCCCGT AGCCTTTATC TGGTTGAACA TAATCGTACC
GATATCACCC TCAGCGTTTA TAAGGGAGAT ACTAAAAAGG CGCTGTTAAC TGAGAATACG
GTTGAAGTGG ATTCTATCGA TGTAGCGGTG ACCGCCGAGT TAGCGGGGAC TTGGACAGGA
CTTGAGAGTC TATCCCATAA GAGGGTTCAG GCCATGTTGG CCTATCGATA CAATATGTTG
ACTCCCGTGC CCATGTACTA CGAAGAAAGT AGCGATATGC TGACTATGCT CAATAGCTTA
AATGCAGGGC GCATAGATGC CGTGCTGGAT TATAAATCTA ATTTGCTTAT GTATGTGCCT
AAGCTGAAGG CGCCACAAAA TTTTGTGATT ATTCAAGGCG TACTCAAGGC TGAAACCTAT
TTCGCCTTCG CGAATACTGA AAAAGGTCAG ATGCTGAAAC ACCATTTTGA CCTTGCACAT
AAACGTTTAA TTGATTCGGG TGAACAGGAC AGGCTTTACC TTGAAACGCT TGAAAAACGA
AGGGTTGATG GTGAAAAATA G
 
Protein sequence
MRRFFAIFCL LLAVLPVSIC AAQPIVVNVA TASWDDFANR DETGYYFELL QRVFPEPEWQ 
LKVQFMPFAR SLYLVEHNRT DITLSVYKGD TKKALLTENT VEVDSIDVAV TAELAGTWTG
LESLSHKRVQ AMLAYRYNML TPVPMYYEES SDMLTMLNSL NAGRIDAVLD YKSNLLMYVP
KLKAPQNFVI IQGVLKAETY FAFANTEKGQ MLKHHFDLAH KRLIDSGEQD RLYLETLEKR
RVDGEK