| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4254 |
|---|
| Symbol | |
|---|
| ID | 7089195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 5055460 |
|---|
| End bp | 5056830 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643463128 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002360143 |
|---|
| Protein GI | 217975392 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[V] Defense mechanisms |
|---|
| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCC TAGCGCTCGA AGGCGTTAGC TTCAACTATG GCAGCCAGTT ACCGACTGTA
TTGCAGGAGG TAAACTTGGC CATTGGCACC GGCCAATGCC ATTGCGTGAG CGGTCCTACG
GGCTCTGGGA AATCGAGTCT GCTAAACCTA CTGGCGGGCG TGTTAAATCG CCCGCATGAA
GGTGACATCT GGCGTTACCC ACAACTGGTT ACGGGTCTGG TGATGCAGGA CCCGCAAACT
CAGTTACTTC GGCAAACCGT TGGCGCCGAA GTGGCTTTCG CCTTAGAAAA TCTCGGCATT
CCCGCTGAGC AAATGCTACC TAAAGTGCAA TTGGCACTAC GGCGCGTGGG CTTGTATCTG
CGTCTCGATA CCCAAGTCAG CACGCTTTCC CTCGGCCAAA AATATCGTTT AATGATTGCC
GCCCAACTGG TGTGCGAGCC GCATTTACTG CTGCTTGATG AGCCTTGGGC GCAACTCGAT
GATCACGGTG TGAGTGAGCT GCTGGTCGTG CTCCGCAATC TTATCCAAGA TGGCATGGCG
CTAGTGTTGG TTGAACATAA CGCCTCGGCC TTCGCTGAGA TTATTCAGCA TTACTGGCAG
TTAGAGGCCA GCAAGCTATC CGAAGGCGTC TATACCGTGA CCGATGCGCC GCAAACTGAG
GCGCCTGCGT GGCGAAATCA GCCTAAGTTT GAGCACTTAG GTAAAGTCTT GGTCAGCGCC
GAAGCCTTTG ATTTTGGCTT CGATGCTTGT CCTACATTAT TTGCGTGTCC GCACGGATTC
CAATTGCAGG CGGGTGAGAT AGTGACCTTA GTGGGAGATA ACGGCTCAGG TAAAACTAGT
TTGTTGAAAA CCATAGCTGG CGTACTTAGT TCAAGACAGC GTCTTCCGCT TAAAGTGCTC
GGGCGAAGAC CTAAGCTGGG GATTTATGGC GCTGAGCTGG GTCTGCTGAT GCAAAGGCCG
AGTCGACAAT TATTCGAGAC CAGCGTGCTG GCCGAAATGC AGTTTAGCCT TAGGCGTTTT
GAACTTCCCA AAGAACGCGC GGCGCAGATG TTGGATGAAT TGGATTTATT TAGCTTAGCT
CAGCTGTCGC CCCACAAATT ATCCTACGGT CAACAGCACT TGATTGCCTT AGCGTCACTC
GCCTGTTTAC GCCCTAAAGT ATTGCTTTTG GACGATCCAT TGGCGGGGAT GGATAAGCAT
TACTACGGCA AAGTGTGGTA CTTGCTGAAG CGGTTAAGCT CGCAAGGTTG CGCTATTTTG
CTCAGCAGCC ACAGAAGCAT TGAACACAGC GCTGTATCAC GGCAATTGAG TTTGCGTAAT
GGTCTATTGG TGGAGGAATT GATTGAAACA GGAGAGCGTT ATGTGGGCTA G
|
|---|
| Protein sequence | MKLLALEGVS FNYGSQLPTV LQEVNLAIGT GQCHCVSGPT GSGKSSLLNL LAGVLNRPHE
GDIWRYPQLV TGLVMQDPQT QLLRQTVGAE VAFALENLGI PAEQMLPKVQ LALRRVGLYL
RLDTQVSTLS LGQKYRLMIA AQLVCEPHLL LLDEPWAQLD DHGVSELLVV LRNLIQDGMA
LVLVEHNASA FAEIIQHYWQ LEASKLSEGV YTVTDAPQTE APAWRNQPKF EHLGKVLVSA
EAFDFGFDAC PTLFACPHGF QLQAGEIVTL VGDNGSGKTS LLKTIAGVLS SRQRLPLKVL
GRRPKLGIYG AELGLLMQRP SRQLFETSVL AEMQFSLRRF ELPKERAAQM LDELDLFSLA
QLSPHKLSYG QQHLIALASL ACLRPKVLLL DDPLAGMDKH YYGKVWYLLK RLSSQGCAIL
LSSHRSIEHS AVSRQLSLRN GLLVEELIET GERYVG
|
|---|
| |