Gene Sbal223_4246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4246 
Symbol 
ID7089187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp5047616 
End bp5050669 
Gene Length3054 bp 
Protein Length1017 aa 
Translation table11 
GC content50% 
IMG OID643463120 
Productheavy metal efflux pump, CzcA family 
Protein accessionYP_002360135 
Protein GI217975384 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCT CAGTCATCCG CTTTTCGCTC ACGCAGCGCC TATTTGTGCT GATTGTGGCG 
CTGATTATTA TGTTAGCGGG AGCGCGAGCC TGGTTTTCCA TTCCCTTGGA TGCCTTTCCC
GATATTTCGC CCACCCAAGT GAAGATCATC CTCAAGGCGC CCGGTATGAC ACCGGAGGAA
ATTGAAGCGC AAATTACCGT GCCGATTGAA ACCGAACTGT TAGGTATTCC CCATCAATCG
ATTCTGCGCT CGACAACTAA ATACGCCATC AGCGATATCA CCCTCGATTT TGATGAAGGT
ACAGATATCT ATTGGGCGCG CCAACAGGTG AGCGAGCGCA TCGCCGCCGT GTGGGACAGT
TTCCCTGAAG GTGTAACGGG CGGCGTAGCG CCAATGAGTA CGCCGCTCAG CGAAATCTTT
ATGTTTTCAC TCGAAAATCC CAATCTATCG CTGATGGAAA GACGGCAATT ACTCGAATGG
GAAATCCGCC CACAGCTACG CACCGTTGCG GGTGTCGCCG ATGTGAATAT CCTCGGTGGC
TATGCCAAAA GCTTTAGTGT GACCCCTAAA CCTGCGGCCA TGGCAGCTGC TGGCGTGAGC
TTTGCAGCGC TGCAACAGGC AATCGTGGAG AATAATCACA ACGAAGGTGC AGGCAAGCTC
ACCATTGGCA CAGATACCAT CATAGTGCGC GCCGAAGGTC GCATCGATGA CATCGACGAA
CTCAAACAAT TAGTGATCAA GGCCGATGAT GCCAGAGTGT ATCGACTGCA GGATTTGGCC
GATATTCAAA TTGGCCACTT AGCCCGTTAT GGCGCAGTCA CGAAAGACGG CAACGAAACC
GCCGAAGCGT TAATCATCGC CCTGAAAGAC GCTAATACCG CACAAGTGGT CAAAAATATT
AAGGAAAAGC TCGATCAAAT CAGCCTAACC TTGCCAGAAG GCAGCCAGAT AAACACCTTT
TACGACCGCG CAAATCTGAT CAATACCGCG ATTGATACCA TCTCCAATGC CTTGTTCGAA
GCCGTAGTGT TAGTGATCAT CTTGCTGGCG TTGTTTTTAG GTAACGTGCG CGCCGCATTA
GTCGTGTCAC TCTCGCTGCC ACTCGCCGCG CTGATGACGT TTTTGATGAT GGATTACTTC
AATCTTTCTG CGAACTTAAT GAGCCTAGGC GGGCTGGTTA TCGCCATCGG CATGTTAGTG
GATTCATCTG TGGTCGTAGT CGAAAACATG GTGAATCTCA TCGCCACAAA GCAGAGATTA
CCCCGGCTGC ATTTGATTTT TCGCGCGACC AAGGACGTTG CCATTCCCGT GGTGTCGGGC
ACAGTGATCG TCATGATAGT GTTCTCGCCC TTGCTGACCT TGAACGGGCT CGAAGGTAAA
CTCTTTACCC CAGTTGCGGT CACTATCGTG TTTGCCATGC TGTCGGCGCT GGTGTTGTCG
TTAACTGTTA TTCCGGTTAT CGCTTCTTAT CTCGTCAACG AAAAAGCCGC CAAGGAACCT
AAGGCGATTG AAAAGCTTAA ACAGCTTTAT CTGGGCAGCC TCAAGGGCAC GTTTAGCCAT
CAAAAACGCT TTATAGTGAT CGCCTTTAGC TTGCTTATCG TCAGCTTAGG CTTGTTCGGG
TTAGTGGGAA AAACCTTTAT GCCGACCTTA GATGAGGGCG ACATTATTCT GCAGCTAGAG
AAATCCCCGT CGATTTCGCT CGAGGCTTCG ATTGCCATCG ACAAGCAGAT TCAGCAAACT
TTGCTGGCTA AAGTTCCTGA AATCAAACAG ATGGTGGCGC GTACTGGCGC GGATGAAATC
GGCTTAGATC CCATGGGACT CAATGAAACC GATGTGTTCT TAGAACTTTT GCCCCGCAGC
GAATGGCGCT TTGCAAATAA AGAAGCGCTT ATCGATGCGA TCCGCACTGT GTTATTGGAC
TATCCCGGCG TTAATTTTAA CTTCACTCAA CCGATCCAAA TGCGCGTGTC AGAAATGCTC
ACCGGCAGCA TTGGCGACGT AGCGATCAAG GTCTTTGGTA ACGATATCGA CACCTTAGGT
CAGCTCACGA GCCAAATCCA ACAGCTGGTT AATGCCACCA GCGGCAGCGT CGATGTGAAA
ATGGCGATGA TCGAAGGCAG TCCTTTTATC AACCTCACCT TAGATAACGA GCTCGCCCGA
GGCTTTGGCA TGAGCACCAT GGAGTTTGCC CGCTACCTGA AAAGCCAGCT CGAAGGCGTG
ATCGTGACCG AAGTGCTACA GGGTAAAAAG CGCACACCCG TGCTGATTGC TAACAATCAG
AGCCACTTAA GTAGCATTAA TGAGCTTAAA AATCAGTTAC TGGTGATGCC AGATCACTCC
TTAAAACGCC TGAGTGATGT CGCTACCTTA AGCTATAAGC AAGGCCCCAT CCTTATCGAG
CGTGAGCAAG GGAATCGCTT TTCAGTGATC ACCACCAACG TGCAAGGTCG CGATATCGTG
AGTTTTGTAG AAGAGCTCAA CGCAAAAATC GCGCAGGAAA TCAAACTTCC GAGCGGTTAT
AGCGTGAGTT TTGGTGGCGA GTTTGAAAAC CAACAGCGAG CCACCAGCAA TTTACTACTA
GTGATACCCA TTGCTATCGC ACTGATCACT TTGATTTTAT TCACGACATT TGGTTCGCTT
GCCAAAGCGG GCTTAATCCT CGCTAACGTT CCCTTCGCTA TGATGGGCGG CATAGTTAGC
CTGTATTTGT CAGGAGAATA TTTATCAGTG CCCGCCTCGG TTGGCTTTAT CGCCCTACTC
GGCGTCGCTG TGCTCAATGG CGTGGTGATG GTCAGCTATT ACGAACAAAC CAAGCACATG
TTCAGCAACC TGCGCGAACG GGTGGAACAA GGTGCGGCGC GGCGTTTACG CCCCATTTTG
ATGACAGCGA CTACGGCGAT GTTTGGTCTT ATGCCGCTGG TGTTTGCCTC GGGCCCTGGG
GCTGAGATTC AAAAACCTTT AGCAATTGTG GTGATTGGCG GTCTGCTCAC TTCAACCATT
ACCACACTGT ATTTACTGCC AATTCTGTAT TTTTGGCTGG AGAAACGTAA ATGA
 
Protein sequence
MLTSVIRFSL TQRLFVLIVA LIIMLAGARA WFSIPLDAFP DISPTQVKII LKAPGMTPEE 
IEAQITVPIE TELLGIPHQS ILRSTTKYAI SDITLDFDEG TDIYWARQQV SERIAAVWDS
FPEGVTGGVA PMSTPLSEIF MFSLENPNLS LMERRQLLEW EIRPQLRTVA GVADVNILGG
YAKSFSVTPK PAAMAAAGVS FAALQQAIVE NNHNEGAGKL TIGTDTIIVR AEGRIDDIDE
LKQLVIKADD ARVYRLQDLA DIQIGHLARY GAVTKDGNET AEALIIALKD ANTAQVVKNI
KEKLDQISLT LPEGSQINTF YDRANLINTA IDTISNALFE AVVLVIILLA LFLGNVRAAL
VVSLSLPLAA LMTFLMMDYF NLSANLMSLG GLVIAIGMLV DSSVVVVENM VNLIATKQRL
PRLHLIFRAT KDVAIPVVSG TVIVMIVFSP LLTLNGLEGK LFTPVAVTIV FAMLSALVLS
LTVIPVIASY LVNEKAAKEP KAIEKLKQLY LGSLKGTFSH QKRFIVIAFS LLIVSLGLFG
LVGKTFMPTL DEGDIILQLE KSPSISLEAS IAIDKQIQQT LLAKVPEIKQ MVARTGADEI
GLDPMGLNET DVFLELLPRS EWRFANKEAL IDAIRTVLLD YPGVNFNFTQ PIQMRVSEML
TGSIGDVAIK VFGNDIDTLG QLTSQIQQLV NATSGSVDVK MAMIEGSPFI NLTLDNELAR
GFGMSTMEFA RYLKSQLEGV IVTEVLQGKK RTPVLIANNQ SHLSSINELK NQLLVMPDHS
LKRLSDVATL SYKQGPILIE REQGNRFSVI TTNVQGRDIV SFVEELNAKI AQEIKLPSGY
SVSFGGEFEN QQRATSNLLL VIPIAIALIT LILFTTFGSL AKAGLILANV PFAMMGGIVS
LYLSGEYLSV PASVGFIALL GVAVLNGVVM VSYYEQTKHM FSNLRERVEQ GAARRLRPIL
MTATTAMFGL MPLVFASGPG AEIQKPLAIV VIGGLLTSTI TTLYLLPILY FWLEKRK