Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4212 |
Symbol | |
ID | 7089153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 5007270 |
End bp | 5008415 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643463086 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002360101 |
Protein GI | 217975350 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAGA CAATTAAACT TGCCTCAGTT ATAAGCGTGG CGTTATGGAT GGCAGCTTGC AGCCCTCAAG AAGAGAAAGC TCAGGCGGGC GCTGGCCCAC GTAGTATGGA AGTGGGAATC CTTAATGTTG TTGCCCAGCC ACAAGTGATT CAGGTGGAAT TACCTGGACG CAGTAAAGCT TTCCTCGAGG CCGAAGTTCG TCCACAGGTG AGCGGTATTA TCACTAAGCG TAGTTTTGTT GAAGGTGGCA ATGTGAAACA GGGTGAATCC TTGTATCAAA TTGACTCTGC AACTTATAAA GCCGCGTTAG TGAGTGCCAA TGCCGATTTA GCCAGAGCCA ATGCGGGTTT AGCCTCAGCA AAAGCTAAGG CTGCACGTTA TCAGCAACTG GTGAAAACCA ACGCCATCAG TAAGCAAGAA TTTGATGAAG CTGAAGCGGC ATATAAAGAA GCATTAGCGA ATGTCACCGT GGCAGAAGCT GCGATTAACA CAGCTAAAAT CAACCTGCAA TACACTGAAG TATTAGCGCC TATCTCTGGT CGTATCGGTA AATCGAGTGT GACTGCGGGT GCGTTAGTGA CAGCGAACCA AAGCCAAACG CTAGCGACGA TTCAACAACT TGATCCAATT AATGTGGATA TCGCGCAATC GAGTGCGCAG TTGTTACGTC TTAAAGCTAA GTTGCAGCAA GGTAAGCTAC AAGCGTCAGA AAATGCTGAT GTGCAGTTGT TGCTCGAAGA TGGCACACAA TACAGCCATC TCGGTAAGTT GCAGTTCGCC GAAGTGAGTG TGGATGAAAA CACTGGATCT GTGATTCTGC GCGCCGAGTT CCCGAACCCT GAAGGTATCT TGTTACCTGG TATGTATGTT CGCGCTATGC TGAATGCGGG CACCGATCCA CAGGCTATCT TGGTTCCACA AAAAGCCATC ACGCGTAACT CTAAGGGTCA AGCAGTGGCT ATGGTTGTAA ATGACCAAGG TTTAGTCGAA TTGAAAATTG TGACGACCGC TGAAGTGATT GACAACCAAT GGCGAGTCAC TTCTGGTTTA GCTGTGGGCG ATAAACTGAT TGTGGAAGGA TTGCAGAAAA TTCGTCCAGG CGCTCCAGTA ACCACCAAAG TTATTTCTGA AACGCAAGCA CAATAG
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Protein sequence | MRQTIKLASV ISVALWMAAC SPQEEKAQAG AGPRSMEVGI LNVVAQPQVI QVELPGRSKA FLEAEVRPQV SGIITKRSFV EGGNVKQGES LYQIDSATYK AALVSANADL ARANAGLASA KAKAARYQQL VKTNAISKQE FDEAEAAYKE ALANVTVAEA AINTAKINLQ YTEVLAPISG RIGKSSVTAG ALVTANQSQT LATIQQLDPI NVDIAQSSAQ LLRLKAKLQQ GKLQASENAD VQLLLEDGTQ YSHLGKLQFA EVSVDENTGS VILRAEFPNP EGILLPGMYV RAMLNAGTDP QAILVPQKAI TRNSKGQAVA MVVNDQGLVE LKIVTTAEVI DNQWRVTSGL AVGDKLIVEG LQKIRPGAPV TTKVISETQA Q
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