Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4203 |
Symbol | |
ID | 7089144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4995420 |
End bp | 4997684 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643463077 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002360092 |
Protein GI | 217975341 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTCGAT GGCTGAAAGG TTTTTTGTTT ATTAGGGATC GAGACTTTTT AAATCCTGAT AGAACAATAT TAAAAACCAG CTTATTGCGG ATTATTCTGC TCAGTGGCGC GATGTTGACC GCTAGCATAG TGCTGCATAG CTCTTTAATT GCGTATCAGT TAAACCTCGC TTTCATTATC AGCATTACGG TCAGTTTTTT AACCGTACTC TTCTTAACTT TATGGTTTAC CCGCAAATAT TTACTCGCCA GCTCAATTAG CCTGCTGGCC ATGGTGATTG CCGCCTGTAT TTCTATACTC TTGTTTGTCC CAGACTTTAA CTTATCGCAG GCGGGGATTA CCTTCTTATA TACCTTGCCC TTAATGGCGC TTTTTCTATT TGGCAGAAAA GTGGCCGTTA TTATGATGTT TTTTAATGTA TTGCCTTTTC TACTGCTACT GCGTAACCAA AATATTCCCC CGATTATTGA TATTGATATC AGTCTGCCTG CAACCCACGC TTATCTGAAT GGCTTGCTGT TTGTCTTTTT TAATATATGT ATTCCCTTGT CGGCGATGCG CCTGCTAAAA ACCCAGAAAG TCCATGCGCA GCAAATGATC CAGCATCAAA ATGATCTGCA ACGTACCTTA GATCAATATG CTGAAATCTT TGAAAATAAT GGTACCGCGT CCTTCTTCTG TAATGAGGAC GGGGTGATCC TCAACCTGAA TAATGCGGCC AAAGAAATCG CCGGAGAGGT CACACTAAAC CGCACTCGCC TATGTGACAT TTTTGAACTT ACCGAAGATA CCAGCACAAA CTTACTGGCG GCCGCGTTTC CGACCCATTT AAAGAACAAT AACAGTATTA AATATCTGCT GCAGAAAGCC TCATTAGAGC ACCATGACAC TTTGTTGTTT CACTGCCACG ATGTCACTGA ACAGGCAAAC CATGCGATTG AACTAAGCCG ACTTAAAAAG CACCATATCA GCACACATTT CTATGATTTA GTGACCGGAT TACCCAACGA GAATCACTGG TATAACCCAG CCCCAAGTAC GATCCATTTG GATATGACAG TCGCCTTAGT CAAAATTGAT AATCTGAGTC AAATCAATGC GGCATTCGGT ATCAGCGTCG GGGATGCCAT CTTAAAAGCC TTTGCGACCG AACTCAAAAA TCGCTTTGGT CATCACGCAA AAATATACCG GTTTAGGGGA GCCTCGTTTG CGCTTGAGTT TACCAGCCTG CCGCTGATCT CCCCCGAAAA CCTCGCGCTA CAATTACGCG AGCGTATTCC AACAAACCTG CAGCTCAAAC ATGAACAACA GATTGAATAT CACCTCGAGT GCCGAGTCGG TTGCAGTTCG GGTAATAAAG CCTCACCGCA GCAAGCAGCT GAGCAATGTT TAATTGCCAT TAAGCAAACC ACCCAAGCTA GCCCAGTCAT GGTGTATTAC ATTGGTTTGA TTAATAATCT TCTCGAAGCC TCATCACAGA AAGCCAAAAT TCGCGACGCA TTGAAACACA ATCGTCTGGA AATGTGGCTA CAGCCTAAAG TAAGGGCAGA TGGCCACATT ATTAGCTTTG AAGCGCTGGC AAGAATGTTC GATGAAGACG GCACTATGAT TATGCCGAAC ACGTTTATTC CCATCATAGA GTCATCCCAA TTACAGGCGA TTTTTGCGAT AAAAGTCTTC AGGCAATTAC TACAACTGAT CCGTTCTTGG CCGAAAAATG TGCCTCTGGT CAGGATAGCC TTCAACTTAT CTGGGCAAGA TATTTTATCG GATCGCTTCT TTAAAGTGTT GATCCAAACC TATATGAATC ACCCCGAACT CATCCCATTA TTAGAGATTG AAATCACGGA AACCTCAGTA TTTTCAACCC ATAAAGAAAC GGGCCGACGC CTAAACACCT TAGCTCGCAT GGGAGTATCT ATCGCCATTG ACGATTTTGG TACTGGCCAT GCGTCATTAA GCCAACTCAT TGATATCAGT GCCGACACGA TTAAAATCGA CCGCTGCTTT GTCAGTCAAA TGGGCATTAG TGAACGCCAC ACCCAAATTG TCAACGCCGC CATCCTGTTA GCCAAGAGCT TAAAACTCAA CGTCATAGCC GAAGGTATAG AAACCGAAGC CCAGTTATTG CAACTCACGG CGTTAGGATG TGAACAATTT CAAGGCTATC TATTCGGTAA ACCCGCACCC GCGAATCTAT GGCTGAAAAC CTTTCAAATG CAAACGCCCA CACACTGGTT CGCCAATAAA AAGAGCGCCA ACTAA
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Protein sequence | MLRWLKGFLF IRDRDFLNPD RTILKTSLLR IILLSGAMLT ASIVLHSSLI AYQLNLAFII SITVSFLTVL FLTLWFTRKY LLASSISLLA MVIAACISIL LFVPDFNLSQ AGITFLYTLP LMALFLFGRK VAVIMMFFNV LPFLLLLRNQ NIPPIIDIDI SLPATHAYLN GLLFVFFNIC IPLSAMRLLK TQKVHAQQMI QHQNDLQRTL DQYAEIFENN GTASFFCNED GVILNLNNAA KEIAGEVTLN RTRLCDIFEL TEDTSTNLLA AAFPTHLKNN NSIKYLLQKA SLEHHDTLLF HCHDVTEQAN HAIELSRLKK HHISTHFYDL VTGLPNENHW YNPAPSTIHL DMTVALVKID NLSQINAAFG ISVGDAILKA FATELKNRFG HHAKIYRFRG ASFALEFTSL PLISPENLAL QLRERIPTNL QLKHEQQIEY HLECRVGCSS GNKASPQQAA EQCLIAIKQT TQASPVMVYY IGLINNLLEA SSQKAKIRDA LKHNRLEMWL QPKVRADGHI ISFEALARMF DEDGTMIMPN TFIPIIESSQ LQAIFAIKVF RQLLQLIRSW PKNVPLVRIA FNLSGQDILS DRFFKVLIQT YMNHPELIPL LEIEITETSV FSTHKETGRR LNTLARMGVS IAIDDFGTGH ASLSQLIDIS ADTIKIDRCF VSQMGISERH TQIVNAAILL AKSLKLNVIA EGIETEAQLL QLTALGCEQF QGYLFGKPAP ANLWLKTFQM QTPTHWFANK KSAN
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