Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4200 |
Symbol | |
ID | 7089141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4991690 |
End bp | 4993543 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643463074 |
Product | Integrase catalytic region |
Protein accession | YP_002360089 |
Protein GI | 217975338 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGATT TTGAGGATGA ATTTAGTGAG TCTGAATTAG TTAAAAAACC AGATACCCCC ATTCAATATG TGAAGTTAGA AGATACAGCA TTAGTCAAAA GAGACTTAGA TACCTTCCCT GAATTTTTAA GAGACAATGC GTTAAACAAA TATCAACTCA TTGTCTTCAT AGACAAAAAA ATTTCTGGTG GATGGACTCA AAAAAATCTA GATCCAATTC TTGATGTTCT TTTTACTACG GCCATGGACA AGCGGCCTAA CTGGCGAACG TTAGTCCGTT GGCGTAAAAG CTACATTGAA AGTGATGGTG ACCTTGCATC ATTAGTCGTT AAGCGACACA AAATGGGTAA TAGAACGAGT CGAGTTAAGG GGGATGAAGC ATTTTTTGAG CAAGCCCTAA CTCGTTTTTT AGATGCTAAA AGGCCTAAAG TATCTACAGC ATATCAGTAC TATAAAGATG CCATCACAAT TGAAAATGAA AACATTGTTG ATGGACAAAT TCCTATCATT TCTTATAAAA GCTTTAACCA AAGAATAAAG TCATTACCTC CTTATCCTGT TGCAGTGGCG CGGCATGGTA AATTTAAAGC AGATCAATGG TTTGCTTATT GCTCTTCCCA TATTCCCCCA ACGCGAATAT TAGAGCGGGT AGAAATCGAT CACACTCCAC TAGATCTAAT TCTGATTGAC GATGAATTAT CTATCCCAAT TGGCAGACCT TATTTAACTT TGATTGTTGA TGTTTTCAGC GGTTGTGTTT TGGGGTTTCA CTTAAGCTAT CGGTCGCCTT CATATGTTTC AGCTGCCAAG GCAATCGTAC ATGCAATAAA ACCTAAATCA CTTGAAGGTC TTGATATAGA GCTTCAAAAT GAGTGGCCTT GCTATGGTAA ATTTGAAAAC CTAGTTGTGG ATAATGGAGC TGAGTTTTGG TCGAAAAGTT TAGAGCATGC CTGTAAAGAG GCAGGAATAA ACATTCAATA TAACCCAGTT CGTAAACCTT GGTTAAAGCC TTTTGTAGAA CGTTTTTTCG GGATGATTAA CGAATGCTTT TTAGCCGAAA TGCCAGGTAA AACCTTCTCG AATATCCTAG CAAAAGAAGA CTATAAACCG GAAAAAGACG CCATTATGCG CTTTTCTACT TTTGTTGAAG AATTCCATCG CTGGGTTGTT GATATTTATC ATCAAGATTC AGACTCACGT GAAACACGAA TTCCTATAAA ACAGTGGCAG CGTGGCTTTG ATATTTACCC GCCACTAAAG ATGAGTGCAG AGGACGAACA ACGGTTTACT GTGCTGATGG GTATTTCAGA TGAGCGAACA TTAACCAGAA ACGGTTTTAA ATTTGAAGAG TTAATGTATG ACTCTACTGC TTTGGCCGAT TACAGAAAGC ATTACCCACA AACCAAAGAA ACCATCAAAA AAATCATTAA AGTCGACCCT GATGATCTAT CAAGTATCCA TGTTTACCTC GAGGAATTAG GCGGTTATCT TAAAGTCCCC TGTACTGATA ATAGTGATTA TACCCACGGT TTGAGCCTTC ATGAGCATAA AGTGATTAAG AAAATTAATC GTGAGATTAT TCGGGAAGGG AAGGATGATT TGGGATTAGC TAAAGCGCGT ATGGCTATTC ATGCTCGAGT TAAACAAGAG CAAGAAGCAT TTATAGCATC CAAAACCAAA GCAAAAATTA CAGCGGTTAA GAAACAGGCT CAGTTGGCTG ATGTGAGTAG CACAGGCCAA AATACGATAA AAATGAAAAG TGATGATCAG AGCTTACTTT TACCTAATCA ATCAGCAGCT AAACAAATCC ATATTTTCGA AAACTGGGAC GACGATTTAG AGGCTTTTGA ATGA
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Protein sequence | MMDFEDEFSE SELVKKPDTP IQYVKLEDTA LVKRDLDTFP EFLRDNALNK YQLIVFIDKK ISGGWTQKNL DPILDVLFTT AMDKRPNWRT LVRWRKSYIE SDGDLASLVV KRHKMGNRTS RVKGDEAFFE QALTRFLDAK RPKVSTAYQY YKDAITIENE NIVDGQIPII SYKSFNQRIK SLPPYPVAVA RHGKFKADQW FAYCSSHIPP TRILERVEID HTPLDLILID DELSIPIGRP YLTLIVDVFS GCVLGFHLSY RSPSYVSAAK AIVHAIKPKS LEGLDIELQN EWPCYGKFEN LVVDNGAEFW SKSLEHACKE AGINIQYNPV RKPWLKPFVE RFFGMINECF LAEMPGKTFS NILAKEDYKP EKDAIMRFST FVEEFHRWVV DIYHQDSDSR ETRIPIKQWQ RGFDIYPPLK MSAEDEQRFT VLMGISDERT LTRNGFKFEE LMYDSTALAD YRKHYPQTKE TIKKIIKVDP DDLSSIHVYL EELGGYLKVP CTDNSDYTHG LSLHEHKVIK KINREIIREG KDDLGLAKAR MAIHARVKQE QEAFIASKTK AKITAVKKQA QLADVSSTGQ NTIKMKSDDQ SLLLPNQSAA KQIHIFENWD DDLEAFE
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