Gene Sbal223_4166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4166 
Symbol 
ID7088489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4946166 
End bp4946636 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content50% 
IMG OID643463045 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002360060 
Protein GI217975309 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGC CATTTAGTCA ACGACCAAGA CTCACGGCTC ATCCTTCAAA ACGTAAAGCT 
GTGATTAGCT TAACGCCACT CATTGATGTG GTGTTTATCC TATTGGTGTT TTTTATGCTG
TCTTCCAGTT TTCTAGACTG GCGTACTGTG GCGCTCGATA CCAGCACGGC AGGTAGCCCC
GCTCCCGCTG AGCAAGCGCC ATTTTTAGTA CAAATTAGCG CAGACCAACT ACAACTAAAC
GGCGAAACGA TCACACTGGA AGCATTACAG CAAAAAGCAC AAGGGCGACA GCCTGCAAGC
CAAATGGTGA GCCTACAGCC GCAGGCGGAT ACTCCAGTAC AAAGGTTAGT GCGTGTATTA
GATGCACTTA ATGCCGCAGG GATTGCGCCG CTAACACTGG TAGAAGACTC CAATTGGCAA
CCCGCACCTG CGACTAAAGC GGACGGTAAA AACATGGAGA ACAGCCACTA A
 
Protein sequence
MQAPFSQRPR LTAHPSKRKA VISLTPLIDV VFILLVFFML SSSFLDWRTV ALDTSTAGSP 
APAEQAPFLV QISADQLQLN GETITLEALQ QKAQGRQPAS QMVSLQPQAD TPVQRLVRVL
DALNAAGIAP LTLVEDSNWQ PAPATKADGK NMENSH