Gene Sbal223_4134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4134 
SymbolompR 
ID7088457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4909314 
End bp4910039 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content55% 
IMG OID643463013 
Productosmolarity response regulator 
Protein accessionYP_002360028 
Protein GI217975277 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAAG AAACCTCGAA AATCCTCGTC GTCGATGATG ATATGCGCCT GCGAGCGTTA 
CTCGAGCGTT ACCTGATGGA GCAAGGTTAT CAGGTGCGCA GCGCGGCCAA TGCCGAGCAG
ATGGACCGGC TATTAGAACG CGAAAACTTC CATCTACTCG TGCTCGACTT GATGTTACCC
GGTGAAGATG GCCTATCTAT CTGCCGCCGT TTGCGCCAGC AAGGTAATCC TATTCCGATC
GTGATGCTGA CGGCCAAGGG CGATGAAGTC GACCGTATTA TTGGCCTAGA GTTAGGCGCC
GACGATTATC TGCCAAAACC TTTCAATCCA CGGGAATTAC TCGCACGGAT CAAAGCCGTG
ATGCGTCGCC AAACCCAAGA TGTGCCCGGT GCGCCAGCCC AGCAGGAAGC GCAGATCAGC
TTCGGTGAGT TTTCGCTGGA TTTAGCAACC CGTGAGATGT ACCACGGCGA CGAATCGATT
GCGCTCACCA GCGGTGAGTT TGCCGTGCTT AAAGTGCTCG TCACCCATCC ACGCGAGCCC
TTGTCTCGGG ATAAGTTGAT GAACCTCGCC CGTGGCCGCG ATTATTCGGC GCTAGAACGC
TCCATCGACG TACAAGTGTC ACGTTTGCGG CGTTTAATCG AGAAAGATCC TGCGAATCCG
CGCTACATTC AAACTGTGTG GGGATTAGGT TATGTGTTTG TGCCCGATGG CGCAGCGCGT
CGATGA
 
Protein sequence
MGQETSKILV VDDDMRLRAL LERYLMEQGY QVRSAANAEQ MDRLLERENF HLLVLDLMLP 
GEDGLSICRR LRQQGNPIPI VMLTAKGDEV DRIIGLELGA DDYLPKPFNP RELLARIKAV
MRRQTQDVPG APAQQEAQIS FGEFSLDLAT REMYHGDESI ALTSGEFAVL KVLVTHPREP
LSRDKLMNLA RGRDYSALER SIDVQVSRLR RLIEKDPANP RYIQTVWGLG YVFVPDGAAR
R