Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4134 |
Symbol | ompR |
ID | 7088457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4909314 |
End bp | 4910039 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643463013 |
Product | osmolarity response regulator |
Protein accession | YP_002360028 |
Protein GI | 217975277 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAAG AAACCTCGAA AATCCTCGTC GTCGATGATG ATATGCGCCT GCGAGCGTTA CTCGAGCGTT ACCTGATGGA GCAAGGTTAT CAGGTGCGCA GCGCGGCCAA TGCCGAGCAG ATGGACCGGC TATTAGAACG CGAAAACTTC CATCTACTCG TGCTCGACTT GATGTTACCC GGTGAAGATG GCCTATCTAT CTGCCGCCGT TTGCGCCAGC AAGGTAATCC TATTCCGATC GTGATGCTGA CGGCCAAGGG CGATGAAGTC GACCGTATTA TTGGCCTAGA GTTAGGCGCC GACGATTATC TGCCAAAACC TTTCAATCCA CGGGAATTAC TCGCACGGAT CAAAGCCGTG ATGCGTCGCC AAACCCAAGA TGTGCCCGGT GCGCCAGCCC AGCAGGAAGC GCAGATCAGC TTCGGTGAGT TTTCGCTGGA TTTAGCAACC CGTGAGATGT ACCACGGCGA CGAATCGATT GCGCTCACCA GCGGTGAGTT TGCCGTGCTT AAAGTGCTCG TCACCCATCC ACGCGAGCCC TTGTCTCGGG ATAAGTTGAT GAACCTCGCC CGTGGCCGCG ATTATTCGGC GCTAGAACGC TCCATCGACG TACAAGTGTC ACGTTTGCGG CGTTTAATCG AGAAAGATCC TGCGAATCCG CGCTACATTC AAACTGTGTG GGGATTAGGT TATGTGTTTG TGCCCGATGG CGCAGCGCGT CGATGA
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Protein sequence | MGQETSKILV VDDDMRLRAL LERYLMEQGY QVRSAANAEQ MDRLLERENF HLLVLDLMLP GEDGLSICRR LRQQGNPIPI VMLTAKGDEV DRIIGLELGA DDYLPKPFNP RELLARIKAV MRRQTQDVPG APAQQEAQIS FGEFSLDLAT REMYHGDESI ALTSGEFAVL KVLVTHPREP LSRDKLMNLA RGRDYSALER SIDVQVSRLR RLIEKDPANP RYIQTVWGLG YVFVPDGAAR R
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