Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4123 |
Symbol | |
ID | 7088446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4891213 |
End bp | 4892580 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643463002 |
Product | MATE efflux family protein |
Protein accession | YP_002360017 |
Protein GI | 217975266 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTG CTAAATCAAC TTGGCTCGAC CTAATGCTTA ACGGCGCGAA AAATCGTCAA TTACTGGCGC TTGCCCTGCC GATGATACTC TCCAATATCA CTATCCCACT TTTGGGCTTA GTCGATACGG CTGTCATAGG TCATCTGAGT GAAGCCTATT ATTTAGGGGG AGTCGCTGTC GGGTCAACGA TTATCACATT AATCATTTGG TTATTGGGAT TTTTGCGTAT GGCGACCACA GGTTTAGTCG CGCAGGCCTA TGGTGCAAAT GATCTTCACG CCCAGCATAA ACTCTTAGTC CAAGGCGCTA TGCTAGCTGT GTTATTGGGC GCTGGCGTTA TCGCGCTGCA AGTCCCGATA TTAAATTTAG CGCTAGGATT ATCCGAAGCG AGTAGCGAAG TCGAGCGCTA TTGCCGCGAG TATTTTCAGG TACGAATTTG GTCAACGCCC TTCGCCCTAC TCAACCTCGT AATGCTTGGC TGGCTATTGG GACGTCAGCA ACCTAAAGCC GCCATGTGGC AGCTTATATT AGCCAACCTT GCCAATATTA TTCTCGATGT GGTGTTTGTC CTCGGCTTAG GCTGGGGCGT TAAAGGCGCC GCCCTCGCCT CAGTCTTTGC CGATATCACC GCTTTCTCAG TCGCACTCAC TATGGTGTTA CAGCAACTCA AGCGCGAAGC CGATTTTCAC TTATCCCAGC TATTACCCCA TGTCACCCTG ACGGGGTACG GCAAATTACT GAGGCTCAAC ACAGATATTT TTATCCGTAG CCTCTGCCTG CAAGCGGCCT TTGCCTTTAT GACTTTTCAT GGTGCGGGTC TGGGTGATAA TACCGTTGCC GCCAATGCCG TGTTACTGAA TTTACTGCTG TTAATCTCCT ATGCACTCGA TGGCATTGCC TATTATGCCG AGGCAGAAGT CGGCCGAGCC TATGGCCAAA AACAGGCGGA GCAATTACGG GAAGCAGTGA TCTTAGCCTG GAGCTGGTCG GCCATTACTG CGTTAGGGTT CTGCGCTGTA TTCAGTCTTT TTGGCAGTAA TATTATCGCG TTACTGACCA GCATTAATGA GGTCAGAGCC ACAGCACAGA CCTATCTTAT CTGGCTGATA TTTTTGCCTT TATGGTCTTT TAGCTCGTAT TTATTCGACG GGGTTTATAT CGGTGCAGCT AAAGGCAAAG TGATGCGCAA TAGCATGATA CTCGCCACCT TCGGTGCATT TTTCCCGACA TGGTATTTGC TGCAGCAACT GTTATTGCCT GAGCAAGGTA ACCACGCCCT TTGGGCCGCC ATGAGTGTCT TTATGATCGC CAGAAGCCTA ACGCTTGCGG GGCACTATTA TTTCAGCAAA AGCTTTTTGA ATAAATAA
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Protein sequence | MNTAKSTWLD LMLNGAKNRQ LLALALPMIL SNITIPLLGL VDTAVIGHLS EAYYLGGVAV GSTIITLIIW LLGFLRMATT GLVAQAYGAN DLHAQHKLLV QGAMLAVLLG AGVIALQVPI LNLALGLSEA SSEVERYCRE YFQVRIWSTP FALLNLVMLG WLLGRQQPKA AMWQLILANL ANIILDVVFV LGLGWGVKGA ALASVFADIT AFSVALTMVL QQLKREADFH LSQLLPHVTL TGYGKLLRLN TDIFIRSLCL QAAFAFMTFH GAGLGDNTVA ANAVLLNLLL LISYALDGIA YYAEAEVGRA YGQKQAEQLR EAVILAWSWS AITALGFCAV FSLFGSNIIA LLTSINEVRA TAQTYLIWLI FLPLWSFSSY LFDGVYIGAA KGKVMRNSMI LATFGAFFPT WYLLQQLLLP EQGNHALWAA MSVFMIARSL TLAGHYYFSK SFLNK
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