| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4066 |
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| Symbol | rplA |
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| ID | 7089684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4827387 |
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| End bp | 4828088 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643462944 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_002359962 |
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| Protein GI | 217975211 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000212774 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.011135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAGC TAACTAAACG CATGCGCGTA ATTCGCGAGA AAGTTGACGG TACTAAAAGC
TACGATATCA ACGAAGCTGT TGCTCTGTTA AAAGAATTAG CAACTGCAAA ATTCGTTGAA
AGTGTAGACG TAGCAGTTAA CCTGGGTATC GACCCACGTA AATCTGACCA AAACGTTCGT
GGTGCAACAG TGTTGCCACA CGGTACTGGT CGTGACGTTC GCGTTGCAGT ATTTACACAA
GGTGCAAATG CTGAAGCTGC TAAAGCAGCT GGCGCTGAGC TAGTTGGTAT GGATGATCTG
GCTGAGAAAA TCAAAGCCGG TGAAATGAAC TTTGACGTGG TTATCGCATC TCCAGATGCA
ATGCGCGTTG TTGGTATGTT AGGTCAAATC TTAGGCCCAC GTGGTTTAAT GCCTAACCCT
AAAACAGGTA CAGTAACGCC AAACGTTGCT GAAGCTGTTA AGAATGCCAA GGCTGGTCAA
GTTCGTTACC GTAACGACAA GAACGGTATT ATCCACACTA CTATCGGTAA AGTGGATTTC
ACACCAGTTC AATTGAAAGA AAACTTGGAA GCGTTAGTGT CAGCACTGAA AAAGGCTAAG
CCTGCAGTTG CTAAAGGCAT TTTCGTGAAA AAGATCAGCA TCTCTACCAC TATGGGTGCA
GGTGTTGCAG TTGATCAAGC TACGCTTGAA ACAACCGTAT AA
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| Protein sequence | MAKLTKRMRV IREKVDGTKS YDINEAVALL KELATAKFVE SVDVAVNLGI DPRKSDQNVR
GATVLPHGTG RDVRVAVFTQ GANAEAAKAA GAELVGMDDL AEKIKAGEMN FDVVIASPDA
MRVVGMLGQI LGPRGLMPNP KTGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF
TPVQLKENLE ALVSALKKAK PAVAKGIFVK KISISTTMGA GVAVDQATLE TTV
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