| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4042 |
|---|
| Symbol | rpsH |
|---|
| ID | 7089660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4805638 |
|---|
| End bp | 4806030 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643462920 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_002359938 |
|---|
| Protein GI | 217975187 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000122909 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000000313714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCTAT TGCGGATATG TTAACCCGTA TTCGTAACGG CCAAGCTGCT
AACCACGTAT CGGTGAAGAT GCCTTCAGCT AAGTTGAAAG TCGCAATTGC GAAACTACTT
AAAGATGAAG GTTATATCGC TGATTACGCC GTAGCAGATG AAGCCAAGCC TGAACTGGAA
GTTACTTTAA AGTATTTCCA AGGCCAACCA GTCGTTGAGA CTATCCAGCG TGTAAGTCGC
CCTGGTCTTC GTATTTACAA AGGTAAAAAC GAACTTCCAA AGGTGATGGG CGGTCTGGGT
GTCGCAATTG TGTCCACTTC TAAAGGCTTG ATGACTGATC GTGCCGCCCG CCTTGCAGGC
ATGGGTGGCG AGGTTATCTG CTACGTAGCT TAA
|
|---|
| Protein sequence | MSMQDPIADM LTRIRNGQAA NHVSVKMPSA KLKVAIAKLL KDEGYIADYA VADEAKPELE
VTLKYFQGQP VVETIQRVSR PGLRIYKGKN ELPKVMGGLG VAIVSTSKGL MTDRAARLAG
MGGEVICYVA
|
|---|
| |