Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4025 |
Symbol | |
ID | 7086244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4795803 |
End bp | 4796489 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643462903 |
Product | heme exporter protein CcmB |
Protein accession | YP_002359921 |
Protein GI | 217975170 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0197345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00000969961 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGAG GCATCAGTTT TACCCAGGCA TTTTTCACCT TGCTGCAGCG AGATCTTAAA ATTGCCATTC GTCACCGCGG CGACATTTTT AACCCACTGC TATTTTTTAT TATGGTTGTG ACCTTATTCC CACTGGGGAT TGGCCCAGAG CCACAAATGT TAGCCCGTGT GGCTCCCGGG ATAATTTGGG TTGCAGCGTT ATTAGCCTCT ATGTTGTCAC TTGAAAGACT GTTCAAAGCA GACTTTAGTG ATGGCAGCTT AGAGCAAATG TTATTGAGCC CACAGCCATT AGCCATTCTG GTATTAGCCA AAGTGTTAGC CCATTGGATT TTAACCGGTG TGCCACTGAT TATTATTGCG CCACTGTTAG CGGTGCTACT CAATTTAGAT GGCAATAGTT ATGGTGCGTT AATATCGACC CTTGCGCTAG GCACGCCAGT ATTATCGCTA TTAGGTGCCA TTGGTGTGGC ATTAACCGTC GGCCTTAGAA AAGGTGGCGT GTTACTCAGC TTACTTATTT TGCCCTTGTA TATTCCGGTT CTCATTTTTG CAACGAGTGC CATAGACGCG GCAGGAATGA ATTTACCCTA TGACGGTCAG CTCGCTATAA TAGGCGCTAT GCTGGTCGGA TCGTTAACCT TAGCACCTTT TGCAATTGGT GCATCTCTGC GAGTGAGTAC TAACTAA
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Protein sequence | MKRGISFTQA FFTLLQRDLK IAIRHRGDIF NPLLFFIMVV TLFPLGIGPE PQMLARVAPG IIWVAALLAS MLSLERLFKA DFSDGSLEQM LLSPQPLAIL VLAKVLAHWI LTGVPLIIIA PLLAVLLNLD GNSYGALIST LALGTPVLSL LGAIGVALTV GLRKGGVLLS LLILPLYIPV LIFATSAIDA AGMNLPYDGQ LAIIGAMLVG SLTLAPFAIG ASLRVSTN
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