Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4024 |
Symbol | |
ID | 7086243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4795141 |
End bp | 4795791 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643462902 |
Product | cytochrome c biogenesis protein CcmA |
Protein accession | YP_002359920 |
Protein GI | 217975169 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00131929 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000298628 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACAAATA TAACTAAAGA AACCACATTA GTGTCAGCCA GCAAGCTGAC CTGTATCCGC GAAGAACGCA TCCTTTTTGA TGAGTTAAGT TTTGATATTA ATGCCGGTGA TATTGTTCAG ATTGAAGGCC CTAACGGCGC GGGCAAAACC AGTTTATTAC GCATATTGGC TGGTCTTTCT CGCCCCTATG CCGGACAAAC CTTTTACAGA AATGAAGACA TAAACCGCTG CCGTGATGAA TACAATGAAG ATCTCTTGTA TCTCGGCCAT TTAGCGGGAG TGAAATGCGA GCTTACCGCC GAAGAAAACC TTAATTTCAA TTTAAGAATC AGTGGTTATG ATGACTTTGA TACCTCAGCC ATTTTAGCCA AAGTGAACTT AACCGGTTTT GAAGAGGCGC TTGCCGGACA TTTATCCGCA GGCCAGCATC GCAGAACCGC GCTATCGAGA TTGTGGCATA GCAATTGTAA AATTTGGATC CTTGACGAAC CTTTTACCGC GATCGATAAA AAAGGCGTCG AAGAGCTGGA GCAATTATTT ATTCAGCATG CGGATAATGG CGGGTGTGTG ATCCTCACAA CTCACCAAGA TATGGGCATT ATCAAAGATG ATAGGCTTCG TAAAATTCGT CTAGATTATC GCTTCATATA A
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Protein sequence | MTNITKETTL VSASKLTCIR EERILFDELS FDINAGDIVQ IEGPNGAGKT SLLRILAGLS RPYAGQTFYR NEDINRCRDE YNEDLLYLGH LAGVKCELTA EENLNFNLRI SGYDDFDTSA ILAKVNLTGF EEALAGHLSA GQHRRTALSR LWHSNCKIWI LDEPFTAIDK KGVEELEQLF IQHADNGGCV ILTTHQDMGI IKDDRLRKIR LDYRFI
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