Gene Sbal223_4019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4019 
Symbol 
ID7086238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4789784 
End bp4790263 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content44% 
IMG OID643462897 
Productcytochrome c nitrite reductase, accessory protein NrfF 
Protein accessionYP_002359915 
Protein GI217975164 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID[TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000231176 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00651067 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAACGC TGACAAAAAT CATTGGTGGT CTAGTGCTGT TATTCAGCAT GACGACCGCC 
GTTATGGCAA CACCAGTTGA TACTTACGAA TTCAAAACGC CTGAAAATCA AAAGCGCGGT
TTGTCTTTGG CTCATGAACT ACGTTGCCCA CAGTGTCAAA ACCAAAACTT GATCGACTCA
AACTCACCGG TTGCGCGCGA TCTGCGTCTT GAAGTCTTCA AGATGGTAGA CGAAGGTAAG
GGCGATGATG AGATCATCGA GTTTATGACC AGCCGTTACG GTGAGTTCGT ACTCTATAAC
CCTAAGATGG AAACCAAAAC CTACATTCTT TGGTTGGGTC CTATCGGTTT ATTACTTATG
GGTCTCGTGA TTGGTTTTAT CTTCATTCGT AAACAACGTA TCAGCGGTAA TGTGCCGAAC
GAAATTAGCG AAGAAGATCA GCGAGAGTTA GATACCTTGC TAAAGCGTAA TACTAAATGA
 
Protein sequence
MRTLTKIIGG LVLLFSMTTA VMATPVDTYE FKTPENQKRG LSLAHELRCP QCQNQNLIDS 
NSPVARDLRL EVFKMVDEGK GDDEIIEFMT SRYGEFVLYN PKMETKTYIL WLGPIGLLLM
GLVIGFIFIR KQRISGNVPN EISEEDQREL DTLLKRNTK