Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3997 |
Symbol | |
ID | 7086213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4758577 |
End bp | 4759251 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643462872 |
Product | Ribulose-phosphate 3-epimerase |
Protein accession | YP_002359893 |
Protein GI | 217975142 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCAT TCTTGATTGC TCCATCGATT TTATCTGCCG ATTTTGCCCG TTTGGGCGAT GATGTAAAAG CCGTGTTAGA TGCGGGGACC GACGTAGTGC ATTTTGATGT GATGGATAAT CACTATGTTC CTAACTTAAC AATTGGCCCT ATGGTGTGCC AAGCGCTGCG TAACTACGGT ATTACCGCCG ATATTGACGT GCATTTGATG GTCAAGCCAG TTGACCGCAT CGTGCCTGAT TTTGCTAAGG CGGGCGCGTC TATTATTACT TTCCATCCAG AAGCTTCAGA ACACGTCGAT CGCACACTTC AGTTGATCAA AGAGTGTGGC TGTAAAGCGG GTCTCGTGTT TAACCCTGCT ACACCACTGC ATTATCTCGA CCATGTGATG GATAAGCTGG ATGTGATTCT ATTGATGTCG GTGAACCCTG GTTTTGGCGG CCAATCCTTT ATCCCATCGA CCTTAGATAA GCTGCGTCAA GTGCGTGCGC GTATCGATGC CAGCGGTTTT GATATTCGCT TAGAAGTGGA TGGCGGCGTT AAGGTCGACA ATATTGCCGA AATCGCGGCC GCCGGTGCCG ACATGTTTGT TGCGGGTTCT GCCATTTTCG GCAAGCCAGA TTACAAAACC GTTGTTGATG AGATGCGTGC CGAACTTGCT AAAGTTGGGG CATAG
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Protein sequence | MRPFLIAPSI LSADFARLGD DVKAVLDAGT DVVHFDVMDN HYVPNLTIGP MVCQALRNYG ITADIDVHLM VKPVDRIVPD FAKAGASIIT FHPEASEHVD RTLQLIKECG CKAGLVFNPA TPLHYLDHVM DKLDVILLMS VNPGFGGQSF IPSTLDKLRQ VRARIDASGF DIRLEVDGGV KVDNIAEIAA AGADMFVAGS AIFGKPDYKT VVDEMRAELA KVGA
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