Gene Sbal223_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3946 
Symbol 
ID7086709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4701815 
End bp4702942 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content52% 
IMG OID643462822 
Productmethylcitrate synthase 
Protein accessionYP_002359843 
Protein GI217975092 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG CTAAAAAACT AAGCGGTGCA GGATTACGTG GCCAGAGCGC AGGCGAAACG 
GCATTGAGCA CAGTGGGCGT GTCAGGCAGC GGCCTCACGT ACCGCGGTTA TGATGTGAAA
GATCTCGGTG AAAATGCCAC CTTCGAAGAA GTCGCCTATC TCATTCTTTA CGGCGAGCTG
CCCACTCAAG CCCAGCTTGA TGCCTACAAA ACCAAACTCA AAGGCCTTCG CGGTCTGCCG
CAAGCCTTAA AAGAAGTATT AGAGCGCATT CCTGCTGAAA CTCATCCTAT GGATGTGATG
CGTACTGGCT GCTCTATGCT AGGCAACTTA GAAGCCGAAC ACAGCTTTGC CGATCAGAGT
GAAATCACCG ACCGCCTATT GGCTGCGTTC CCATCGATCA TCTGTTACTG GTATCGCTTT
AGTCACGATG GCGTGCGAAT CGACACTGAA ACCGATGACG ATCAAATTGG CGCGCACTTC
CTGCATTTAT TACATGGTAA AGCGCCGTCG GCACTGCATG CTAAAGTGAT GGACGTATCG
TTAATTCTTT ATGCAGAACA TGAGTTTAAC GCATCAACCT TTACCGCTCG CGTCTGTGCT
TCAACCCTGT CAGACATGCA TTCGTGCGTC ACTGGCGCCA TTGGTTCACT GCGCGGCCCG
CTGCATGGCG GCGCGAACGA AGCGGCGATG GAACTGATCC AAGACATGAA AGATGAAGCC
GATGCGCGCG ACATCTTAAT GGGCAAACTC GAGCGTAAAG ATAAGATCAT GGGCTTCGGT
CACGCTATTT ACCGCGACAG CGATCCACGT AATGCCATCA TCAAAGAATG GTCAGAAAAA
CTGGCTGCCG CCAACGGTGA CGACCGTCTA TACCGCGTAT CGGTTGCCTG TGAAGCCCTA
ATGTGGGAAC AGAAAAAACT CTTCTGTAAT GCAGATTTTT TCCACGCCAG CGCATACCAC
TACATGGATA TTCCGACTAA GTTGTTCACG CCAATCTTCG TGTGTTCACG GGTAACGGGC
TGGGCGGCGC ACGTGATGGA GCAACGCTCT AACAACCGCA TCATCCGCCC AAGTGCCGAT
TATGTGGGCG TGGCCCCACG CAAAGTCGTC CCCATTGCCA ACCGTTAA
 
Protein sequence
MSEAKKLSGA GLRGQSAGET ALSTVGVSGS GLTYRGYDVK DLGENATFEE VAYLILYGEL 
PTQAQLDAYK TKLKGLRGLP QALKEVLERI PAETHPMDVM RTGCSMLGNL EAEHSFADQS
EITDRLLAAF PSIICYWYRF SHDGVRIDTE TDDDQIGAHF LHLLHGKAPS ALHAKVMDVS
LILYAEHEFN ASTFTARVCA STLSDMHSCV TGAIGSLRGP LHGGANEAAM ELIQDMKDEA
DARDILMGKL ERKDKIMGFG HAIYRDSDPR NAIIKEWSEK LAAANGDDRL YRVSVACEAL
MWEQKKLFCN ADFFHASAYH YMDIPTKLFT PIFVCSRVTG WAAHVMEQRS NNRIIRPSAD
YVGVAPRKVV PIANR