Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3938 |
Symbol | |
ID | 7086701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4692155 |
End bp | 4693939 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643462814 |
Product | diguanylate cyclase with GAF sensor |
Protein accession | YP_002359835 |
Protein GI | 217975084 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGA CCATTATCGG GGTGAGCTCA TTTTTTGCTG TGTTAACTAT GCTGGTGCAG TTGATTTGGA ACTATCAGGA TAGTATCGAC AATGCCACGT CGGATATCCG CGAGTATTCA GAATCTATTC TGCCGAGCGT GGCGAAGTCG CTGTGGGACG TTGACCGCAG CCTGCTATCT GATTTGCTCT CTGGTTTAGG GATGATGCCG TTAGTGTCGA GTGTGCATTT AGACAGTATC GACGGTGTCA CTATGCAGTT GGGTAAACCG CTGTTAACCG ACGACGAGTC GCAAACCCTG TTTCATTATC CCGTGACTTA TCAAGATCAA CTGATCGCAA CCTTAACCGT AGGCTTAGAC ACCAACCAGC TTTACTACGA GCTGTGGCGG CAGTTGATTT TTATTGTGCT CGGCAATGGC TTAAAGACCC TGCTGATGAT CTATTTGATC TTGACCTTAG TGCGACTCAT GGTGACGGAT AGATTGTCAG CATTGGAAGA TTTTACTAAT AAAATCAATC TAAAATCGCT AAAGAAGTTA TCTGTGCCCG AGACGGTGAC CGCCAGTCCT GACGAGATTG CCCATGTGGC ATTGTCGCTT AAGGCCATGT ATCAAAGGAT ACGCAACGAC CTCGCTATCA ATAAACGTCA TCAACGCGCG TTACAGCAAC AGCAGCATTT GTTGTCGGAT TTAGTGAAAG AGCGGACCAA AGAACTGGAC TGGCAGTCGC AGTCGAATCA GTTGCTGGCA GAGATTTCGT TGCAATTTTT AAGCATAGAT ACCTGCAATG TGGATAAAAC CTTAGCTGAG GTGTGCCGCA AAATAGGTCA GTTGTTTGAT GTTGAAAGGG TGAGTATTCT CGAATTTCAT CAACAGCATG CCTATTACCG CAGTTTTTGG ACCAGCGAGT TACATGCTAA CAAGGTCCAA GGGATTTCGG TGGACAACAT TACTCAGCTT GCTAAAAAAT TCGAAACTGA ATCGACCTTA GTGATTGAGG ATCTTGAGGC GTTAAAGGCA TTGTCACCGC AGGAATATGA AGTGATGAAA TCCGTGGGCA TTTGCTCTAT TGCTGCCTTT GCGATTAAAA ATGCCGGAGA GTTATTGGGA TTACTCTCGC TGTCGACGGT GTCGCGGCCC TTGAATTGGA ACGCCCAGAA AAAAAATATG CTGACTCAGT TTGCCTCCGC ATTGAACGAG TTACTGCTGC GCGAGCAAAA AGAGCGGCAG ATGATAGTGC TGCAACAAGC GCTGGTTTCT GCCAATACTC AATTGAAAGA AATGGCCGAA ACCGATGAGT TAACGGGCTT AGCCAATAGA CGCCCCTTTA CCGAAAGATT AGAAACCGTA CTACAGGCGG ATACTCCTGC GGGACTGTTT ATGTTGGACG TCGATTATTT CAAATCCTAC AACGACACTT ACGGTCATCT CGAAGGTGAT GTCGTGCTTA AGCGTGTGGC AGATGCCTTA GCGCAGTGCG ATATCCTGCC GCACAATGCT TTATTGGCGC GCATCGGTGG CGAAGAGTTT GCCTTAGTCG TTGAGCATGT CACGCCGGCA CAGTTAACGG CCATTGCCAC GCAGTTGTGT TATCTCGTCG AGCAACTCAA TATACCCCAT CAAGCATCGC CGTTGGCTGT GGTGACTATC AGTATTGGCA GCGTGTTTTT GCCATTAGAT AAGGTCTCGG GGCTTAAGAT GGCCGACGTG TTACGCCGCG CCGATGTTTG CCTCTATCGC GCGAAGGATA AAGGGCGAAA CAGGGTCGAG GTTGAAGTGA TTTAA
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Protein sequence | MTLTIIGVSS FFAVLTMLVQ LIWNYQDSID NATSDIREYS ESILPSVAKS LWDVDRSLLS DLLSGLGMMP LVSSVHLDSI DGVTMQLGKP LLTDDESQTL FHYPVTYQDQ LIATLTVGLD TNQLYYELWR QLIFIVLGNG LKTLLMIYLI LTLVRLMVTD RLSALEDFTN KINLKSLKKL SVPETVTASP DEIAHVALSL KAMYQRIRND LAINKRHQRA LQQQQHLLSD LVKERTKELD WQSQSNQLLA EISLQFLSID TCNVDKTLAE VCRKIGQLFD VERVSILEFH QQHAYYRSFW TSELHANKVQ GISVDNITQL AKKFETESTL VIEDLEALKA LSPQEYEVMK SVGICSIAAF AIKNAGELLG LLSLSTVSRP LNWNAQKKNM LTQFASALNE LLLREQKERQ MIVLQQALVS ANTQLKEMAE TDELTGLANR RPFTERLETV LQADTPAGLF MLDVDYFKSY NDTYGHLEGD VVLKRVADAL AQCDILPHNA LLARIGGEEF ALVVEHVTPA QLTAIATQLC YLVEQLNIPH QASPLAVVTI SIGSVFLPLD KVSGLKMADV LRRADVCLYR AKDKGRNRVE VEVI
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