| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3931 |
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| Symbol | |
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| ID | 7086694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4680840 |
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| End bp | 4682435 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643462807 |
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| Product | threonine dehydratase |
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| Protein accession | YP_002359828 |
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| Protein GI | 217975077 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCAC TTGCATCGCA AGCTCGGACG GATTTAGCAC ATTTTCAGTT GGCACAAAGC
TATCTGCAAA AAATCCTGTT GTCATCTGTG TATGACATAG CGAAAGTGAC GCCGCTTTCA
AGTATGAACA AGTTATCGGC GCGTTTAGGT TGTCAGGTAT TTTTGAAGCG CGAAGATATG
CAGCCAGTGC ATTCCTTCAA GTTACGCGGT GCCTATAACC GTATCGCCCA GCTGACGAAA
GAAGAATGTC AGCGCGGCGT GGTGTGCGCT TCGGCAGGCA ATCATGCTCA GGGTGTGGCG
ATGTCGGCGG CGAGTCGCGG TGTGGATGCT GTGATTGTGA TGCCAGAGAC AACGCCCGAT
ATTAAAGTCG ATGCGGTGCG CCGTTTAGGT GGCAACGTGG TATTGCACGG CCAAGCCTTC
GATCAAGCAA ATGGCTATGC GATGGCGCTG GCTAAAGAAG AGGGCCGAGT CTATATCGCG
CCCTTTGATG ATGAAGCGGT GATCGCAGGC CAAGGCACTA TCGCCCAAGA GATGTTGCAG
CAGCAGCGCG ATCTCGAAGT GGTATTTGTG CCCGTGGGCG GTGGCGGTTT AATTGCGGGT
ATCGCAGCCT ATTACAAGGC GGTGATGCCG CAGGTGAAAA TTGTCGGCGT CGAGCCAGAA
GATGCCGCCT GTTTAAAGGC GGCGATGGAA GCGGGCGAGC CGGTGACACT GGCGCAAGTC
GGTTTATTTG CCGACGGTGT GGCGGTGAAG CGTATCGGTA CTGAGCCGTT TCGAGTCGCA
AAACTGTATG TCGATGAAGT GGTCACTGTG ACCTCGGATG AAATCTGCGC TGCGGTGAAA
GATATCTTCG AAGATACCCG TGCGATTGCT GAACCCGCTG GGGCTTTGTC CTTAGCTGGG
CTTAAAAAAT ATGTCAGCGC CAATGCCAGT GGCGACAGCG GTAAAGGCGA GAAAGTTGCC
GCGATTTTGA GTGGCGCGAA TGTGAATTTC CACAGTCTGC GTTATGTGTC TGAACGCTGC
GAACTCGGCG AGCAAAAAGA AGCGGTACTG GCGGTGAAAG TCCCTGAACG TCCGGGAAGT
TTCTTAAAAT TCTGTGAGTT ACTCGATAAG CGGGTGATGA CAGAGTTTAA CTATCGTTTT
AGTAGTCGCG ATCTGGCCGT GGTGTTTGCT GGCATTCGTT TAAGCCGAGG CCAAGGCGAG
CTTGAACAAA TCATCGCTAC CTTAGAGGCT AACGATTTTG AAGTGCAGGA TTTATCTGGC
GATGAAACCG CGAAATTGCA TGTGCGCTAC ATGGTCGGCG GTCATCCACC TGAGCCTTTA
GAAGAGCGTT TGTTTAGCTT CGAATTCCCC GAACATCCTG GTGCGCTGCT GAAGTTTTTA
ACTACCTTGC AGAGCAAATG GAACATCAGT CTGTTCCATT ATCGCAACCA CGGCGCGGCT
TTTGGCCGAG TGCTGGCGGG ATTTGAAGTA CCCGCGAGTG ATGCTTTGCC GTTCCAACAG
TTTTTAACTG AGTTGGGTTT TGTCTATCAA GAGGAAACCC AAAGTCCTGC CTATCAGCTG
TTTTTAAATG CGGGTAACGG CAGCAAAGTC TTATAG
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| Protein sequence | MLPLASQART DLAHFQLAQS YLQKILLSSV YDIAKVTPLS SMNKLSARLG CQVFLKREDM
QPVHSFKLRG AYNRIAQLTK EECQRGVVCA SAGNHAQGVA MSAASRGVDA VIVMPETTPD
IKVDAVRRLG GNVVLHGQAF DQANGYAMAL AKEEGRVYIA PFDDEAVIAG QGTIAQEMLQ
QQRDLEVVFV PVGGGGLIAG IAAYYKAVMP QVKIVGVEPE DAACLKAAME AGEPVTLAQV
GLFADGVAVK RIGTEPFRVA KLYVDEVVTV TSDEICAAVK DIFEDTRAIA EPAGALSLAG
LKKYVSANAS GDSGKGEKVA AILSGANVNF HSLRYVSERC ELGEQKEAVL AVKVPERPGS
FLKFCELLDK RVMTEFNYRF SSRDLAVVFA GIRLSRGQGE LEQIIATLEA NDFEVQDLSG
DETAKLHVRY MVGGHPPEPL EERLFSFEFP EHPGALLKFL TTLQSKWNIS LFHYRNHGAA
FGRVLAGFEV PASDALPFQQ FLTELGFVYQ EETQSPAYQL FLNAGNGSKV L
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