Gene Sbal223_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3930 
Symbol 
ID7086693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4679440 
End bp4680573 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content52% 
IMG OID643462806 
ProductSerine--pyruvate transaminase 
Protein accessionYP_002359827 
Protein GI217975076 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACCAG CACCGCGTTT TACCGCTTTT AATCCTCCGC GCCGTATTTT GATGGGCCCT 
GGCCCGTCGG ATGTTTATCC CGAAGTGCTT GCGGCGCAGT CCAGACCGAC AATTGGCCAC
TTAGATCCGC TATTTGTCGG CATGATGGAT GAGCTTAAGA GCCTGATCCA ATACGCCTTC
CAAACTAAAA ACGAAATGAC CATGGCAGTA TCCGCGCCGG GCAGTGCGGG CATGGAAACC
TGTTTCGTAA ACTTAGTCGA GCCGGGTGAG AAAGTTATTG TCTGTCGTAA CGGTGTGTTT
GGTGAGCGTA TGCGCCAAAA CGTCGAGCGC GTTGGCGCCA TTGCAGTGCT GGTGGACAAT
GAGTGGGGCG CCCCTGTCGA CCCTGCTGCG GTTGAAGCGG CGCTGAAAAC CAATCCCGAT
GCCAAATTTT TAGCCTTTGT GCACGCAGAA ACCTCTACTG GCGCGCTGTC CGATGCCAAA
ACCTTGTGTG CATTAGCCAA ACAATACGGC TGCTTATCAA TCGTCGATGC TGTGACTTCC
CTTGGCGGTG TCGAGTTAAG AGTCGATGAA TGGGGCATAG ATGCCATTTA TTCCGGCAGT
CAAAAGTGTC TTTCCTGTGT ACCAGGTTTA TCACCTGTGT CTTTCTCGAT CGCAGCGGTA
GAGAAACTCA AGAATCGTAA AACCCCAGTG CAAAGTTGGT TCCTCGATCA AAGTCTAGTG
ATGGCCTATT GGACCAGCGC GGGCGGCAAA CGCAGTTATC ATCACACTGC GCCAGTGAAT
GCCCTGTATG CACTGCATGA ATCCCTGCGT ATGTTGGCGG CTGAAGGCTT AGAGAATGCG
TGGCAACGCC ACCACGAAAT GCATTTAGTG CTGCGTGCTG GGCTGGAAAA GTTAGGGCTT
AATTTTGTGG TGGCCGAAGA TTATCGCCTA CCGCAGCTGA ATACGGTTTA TATCCCAGCA
GGTGTCGATG ATGCCGCAGT GCGGACTCGT TTACTGAAGG ATTACAACCT CGAAATCGGC
GCAGGCCTTG GCGCCCTTGC GGGTAAAGCA TGGCGTATCG GTCTAATGGG CTTTGGTGCC
CGCCGTGAGA ATGTCTCTTT ATGTCTCAAG GCATTAGAAG AAGTGTTGAA TTAA
 
Protein sequence
MLPAPRFTAF NPPRRILMGP GPSDVYPEVL AAQSRPTIGH LDPLFVGMMD ELKSLIQYAF 
QTKNEMTMAV SAPGSAGMET CFVNLVEPGE KVIVCRNGVF GERMRQNVER VGAIAVLVDN
EWGAPVDPAA VEAALKTNPD AKFLAFVHAE TSTGALSDAK TLCALAKQYG CLSIVDAVTS
LGGVELRVDE WGIDAIYSGS QKCLSCVPGL SPVSFSIAAV EKLKNRKTPV QSWFLDQSLV
MAYWTSAGGK RSYHHTAPVN ALYALHESLR MLAAEGLENA WQRHHEMHLV LRAGLEKLGL
NFVVAEDYRL PQLNTVYIPA GVDDAAVRTR LLKDYNLEIG AGLGALAGKA WRIGLMGFGA
RRENVSLCLK ALEEVLN